RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SPATA31C2B4DYI2 1134 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 TBCAO75347 108 aaKnown RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 FCER1AP12319 257 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 EEF1GP26641 437 aaKnown RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 ICAM3P32942 547 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 QARSP47897 775 aaKnown RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 GCLCP48506 637 aaPredicted RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 LRRC63Q05C16 580 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 GIT2Q14161 759 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 KCTD2Q14681 263 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 CCL15Q16663 113 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 ARSHQ5FYA8 562 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 HERC4Q5GLZ8 1057 aaPredicted RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 CCDC186Q7Z3E2 898 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 MYOCDQ8IZQ8 938 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 PURBQ96QR8 312 aaKnown RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 LIMA1Q9UHB6 759 aaKnown RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 DBR1Q9UK59 544 aaKnown RBP15.31■□□□□ 0.04
TPM1-215ENST00000558868 COL4A3BPQ9Y5P4 624 aa15.31■□□□□ 0.04
TPM1-215ENST00000558868 TPM2P07951 284 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 PSMC5P62195 406 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 ERVK-24P63145 666 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 SPRYD7Q5W111 196 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 CENPPQ6IPU0 288 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 RINT1Q6NUQ1 792 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 FAM133AQ8N9E0 248 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 GPRC5AQ8NFJ5 357 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 SMCR8Q8TEV9 937 aaPredicted RBP15.3■□□□□ 0.04
TPM1-215ENST00000558868 ABHD8Q96I13 439 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 MS4A4AQ96JQ5 239 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 MMP19Q99542 508 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 SEL1LQ9UBV2 794 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 ODF2LQ9ULJ1 636 aa15.3■□□□□ 0.04
TPM1-215ENST00000558868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
TPM1-215ENST00000558868 A0A1B0GTH6 734 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 LRRC10BA6NIK2 292 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 KCNJ18B7U540 433 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 PDHXO00330 501 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 NRDCO43847 1150 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 PSAPP07602 524 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 EDNRBP24530 442 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 KCNJ12Q14500 433 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 TCP11X2Q5H9J9 407 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 KCNV1Q6PIU1 500 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 TMC6Q7Z403 805 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 VSTM4Q8IW00 320 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 CSGALNACT2Q8N6G5 542 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 BANK1Q8NDB2 785 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 PIGOQ8TEQ8 1089 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 CCDC43Q96MW1 224 aaKnown RBP15.29■□□□□ 0.04
TPM1-215ENST00000558868 TIPINQ9BVW5 301 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 PCDHA10Q9Y5I2 948 aa15.29■□□□□ 0.04
TPM1-215ENST00000558868 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 ATP9AO75110 1047 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 FAM13AO94988 1023 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 KCNA2P16389 499 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 PTGS1P23219 599 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 GUCY2CP25092 1073 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 NR1I3Q14994 352 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 STXBP4Q6ZWJ1 553 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 C1orf186Q6ZWK4 172 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 FILIP1Q7Z7B0 1213 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 ATP6V0A1Q93050 837 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 NAP1L5Q96NT1 182 aaPredicted RBP15.28■□□□□ 0.04
TPM1-215ENST00000558868 PARK7Q99497 189 aaKnown RBP15.28■□□□□ 0.04
TPM1-215ENST00000558868 REEP2Q9BRK0 252 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 SRRTQ9BXP5 876 aaKnown RBP15.28■□□□□ 0.04
TPM1-215ENST00000558868 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 JPH1Q9HDC5 661 aaPredicted RBP15.28■□□□□ 0.04
TPM1-215ENST00000558868 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 SLC9A2Q9UBY0 812 aa15.28■□□□□ 0.04
TPM1-215ENST00000558868 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 TRIM49BA6NDI0 452 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 SOWAHBA6NEL2 793 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 RGS20O76081 388 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 TGFB3P10600 412 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 Q3C1V9 767 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 HSP90AA4PQ58FG1 418 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 ANKRD40Q6AI12 368 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 MIS18BP1Q6P0N0 1132 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 PPP4R3CPQ6ZMV5 832 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 OTUD6AQ7L8S5 288 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 BRI3BPQ8WY22 251 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 HPS3Q969F9 1004 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
TPM1-215ENST00000558868 RUSC1Q9BVN2 902 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 RTN4Q9NQC3 1192 aaKnown RBP15.27■□□□□ 0.04
TPM1-215ENST00000558868 OLFML3Q9NRN5 406 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 MORF4L1Q9UBU8 362 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 NRBP1Q9UHY1 535 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms