RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 FAM83BQ5T0W9 1011 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 KDM7AQ6ZMT4 941 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 BARHL2Q9NY43 387 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 RAD17O75943 681 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 CRKP46108 304 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 ITIH3Q06033 890 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 KLHL30Q0D2K2 578 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 DACT2Q5SW24 774 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 SWT1Q5T5J6 900 aaKnown RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 BAP1Q92560 729 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 LARP4BQ92615 738 aaKnown RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 LUC7LQ9NQ29 371 aaKnown RBP13.55□□□□□ -0.24
HDAC7-230ENST00000552960 SUFUQ9UMX1 484 aa13.55□□□□□ -0.24
HDAC7-230ENST00000552960 A0A087X0T9 212 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 CCDC172P0C7W6 258 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 FAM228BP0C875 321 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 PCP11498 1178 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 AKR1B1P15121 316 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 C16orf86Q6ZW13 317 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 SNX29Q8TEQ0 813 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 CUEDC2Q9H467 287 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 A6NNZ2 444 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 BAG6P46379 1132 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 GNAQP50148 359 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 TNNC1P63316 161 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 CCDC13Q8IYE1 715 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 LRRC47Q8N1G4 583 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 DDX12PQ92771 950 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 MMTAG2Q9BU76 263 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 GDF3Q9NR23 364 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 KLC4Q9NSK0 619 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 SEC63Q9UGP8 760 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 HNRNPH3P31942 346 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 E2F5Q15329 346 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 RPS6KA1Q15418 735 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 CALCRLQ16602 461 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 AK8Q96MA6 479 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 C6orf50Q9HD87 102 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 CDK5RAP2Q96SN8 1893 aa13.54□□□□□ -0.24
HDAC7-230ENST00000552960 DDX60LQ5H9U9 1706 aaKnown RBP13.54□□□□□ -0.24
HDAC7-230ENST00000552960 DDTLA6NHG4 134 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-230ENST00000552960 FNTAP49354 379 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 KCNMA1Q12791 1236 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 ADAT2Q7Z6V5 191 aaKnown RBP13.53□□□□□ -0.24
HDAC7-230ENST00000552960 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-230ENST00000552960 LAMB1P07942 1786 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 SMIM23A6NLE4 172 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 TLR2O60603 784 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 HGSNATQ68CP4 663 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 TEKT1Q969V4 418 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 DPH5Q9H2P9 285 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 TDRD3Q9H7E2 651 aaKnown RBP13.53□□□□□ -0.24
HDAC7-230ENST00000552960 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
HDAC7-230ENST00000552960 NOVA2Q9UNW9 492 aaKnown RBP13.53□□□□□ -0.24
HDAC7-230ENST00000552960 FRMPD2Q68DX3 1309 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-230ENST00000552960 LAD1O00515 517 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 TDP2O95551 362 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 HSD17B3P37058 310 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 GRB10Q13322 594 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 KRT25Q7Z3Z0 450 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 PODNQ7Z5L7 613 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 RNF10Q8N5U6 811 aaKnown RBP13.52□□□□□ -0.24
HDAC7-230ENST00000552960 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 PIGSQ96S52 555 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 DNAJC18Q9H819 358 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 BLOC1S4Q9NUP1 217 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 CEP83Q9Y592 693 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.52□□□□□ -0.24
HDAC7-230ENST00000552960 ROBO3Q96MS0 1386 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 M0R2N6 131 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 ERVK-9P63128 1117 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 GRM4Q14833 912 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-230ENST00000552960 UNC13DQ70J99 1090 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 SH3BP5LQ7L8J4 393 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 ZNF572Q7Z3I7 529 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-230ENST00000552960 KCNK18Q7Z418 384 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 CPLX4Q7Z7G2 160 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.24
HDAC7-230ENST00000552960 CNKSR1Q969H4 720 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 COA7Q96BR5 231 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 SPAG5Q96R06 1193 aa13.52□□□□□ -0.24
HDAC7-230ENST00000552960 COL4A5P29400 1685 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 NAV1Q8NEY1 1877 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 HMGB1P1B2RPK0 211 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms