RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 AFAP1L1Q8TED9 768 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 TSC1Q92574 1164 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 UBAC1Q9BSL1 405 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 C16orf70Q9BSU1 422 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 RNF41Q9H4P4 317 aaPredicted RBP7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 MLXIPQ9HAP2 919 aa7.94□□□□□ -1.14
PRPF40B-214ENST00000551320 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 RSPH10B2B2RC85 870 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 IFIT3O14879 490 aaKnown RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 ZBTB5O15062 677 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 KPNA6O60684 536 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 F2P00734 622 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 CXCL10P02778 98 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 LGALS2P05162 132 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 PFKMP08237 780 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 CYP21A2P08686 494 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 RSPH10BP0C881 870 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 MARK3P27448 753 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 GATMP50440 423 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 HSD17B4P51659 736 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 ANTXR2P58335 489 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 PTK7Q13308 1070 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 LAMC2Q13753 1193 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 IKBKEQ14164 716 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 UBE2SQ16763 222 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 IMMTQ16891 758 aaKnown RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 BRICD5Q6PL45 260 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 VSIG10LQ86VR7 867 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 MCF2L2Q86YR7 1114 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 CCDC82Q8N4S0 544 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 BANK1Q8NDB2 785 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 RGS22Q8NE09 1264 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 PPTC7Q8NI37 304 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 CAGE1Q8TC20 777 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 ATP6V0A1Q93050 837 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 THAP11Q96EK4 314 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 TGS1Q96RS0 853 aaKnown RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 IWS1Q96ST2 819 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 MPHOSPH6Q99547 160 aaKnown RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 RAD9AQ99638 391 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 MTRQ99707 1265 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 AMNQ9BXJ7 453 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 LRRC2Q9BYS8 371 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 RNPEPQ9H4A4 650 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 UBE2ZQ9H832 354 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 ZMYM6O95789 1325 aa7.93□□□□□ -1.14
PRPF40B-214ENST00000551320 WDR87Q6ZQQ6 2873 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 LAMA4Q16363 1823 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 C17orf102A2RUQ5 167 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 H3BRB1 525 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 LINC01565O15544 149 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 ATP9AO75110 1047 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 BAIAP3O94812 1187 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 PLEKHA8P1O95397 391 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 GHRP10912 638 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 POU3F3P20264 500 aaPredicted RBP7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 ERVK-21P61565 698 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 IGBP1P78318 339 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 ARHGAP4P98171 946 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 PTPN11Q06124 597 aaPredicted RBP7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 DLX2Q07687 328 aaPredicted RBP7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 TMEM62Q0P6H9 643 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 GRM4Q14833 912 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 EPC2Q52LR7 807 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 TCEAL5Q5H9L2 206 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 SESTD1Q86VW0 696 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 FAM122AQ96E09 287 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 MTMR8Q96EF0 704 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 PGBD1Q96JS3 809 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 DSCC1Q9BVC3 393 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 SEZ6LQ9BYH1 1024 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 RWDD1Q9H446 243 aaPredicted RBP7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 TUT1Q9H6E5 874 aaKnown RBP7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 PCDHGC5Q9Y5F6 944 aa7.92□□□□□ -1.14
PRPF40B-214ENST00000551320 LOC102724159A0A0B4J2E5 919 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 B4DLN1 442 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 E7EWF7 191 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 GCOM1H8Y6P7 765 aaPredicted RBP7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 CHRNA1P02708 482 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 POLR2MP0CAP2 368 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 CCND2P30279 289 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 PLA2G5P39877 138 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 MRPL12P52815 198 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 PWP2Q15269 919 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 SERINC5Q86VE9 423 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 TRAPPC12Q8WVT3 735 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 PPP1R16BQ96T49 567 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 GPR20Q99678 358 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 USB1Q9BQ65 265 aaKnown RBP7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 KRT23Q9C075 422 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 IGFLR1Q9H665 355 aa7.91□□□□□ -1.14
PRPF40B-214ENST00000551320 ABHD14A-ACY1A0A1B0GW23 586 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 ADAMTS3O15072 1205 aa7.9□□□□□ -1.14
PRPF40B-214ENST00000551320 GRM6O15303 877 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms