RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 MAGOHBQ96A72 148 aaKnown RBP17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 MMP19Q99542 508 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 DENND3A2RUS2 1198 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 F5H6K3 240 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 KLRC3Q07444 240 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 RBBP5Q15291 538 aaKnown RBP17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 OR6B3Q8NGW1 331 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 UBN2Q6ZU65 1347 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 ASB14A6NK59 587 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L15C9J2P7 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L13C9JLJ4 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L11C9JVI0 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L18D6R9N7 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L22D6RA61 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L17D6RBQ6 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L19D6RCP7 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L20D6RJB6 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 SAT1P21673 171 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 STAT3P40763 770 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 USP17L24Q0WX57 530 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 THAP9Q9H5L6 903 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 PCDHB6Q9Y5E3 794 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 A0A1B0GUA9 196 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 GOLGA8KD6RF30 607 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 PARD3BQ8TEW8 1205 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 CEP95Q96GE4 821 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 NCAPGQ9BPX3 1015 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 KCNH4Q9UQ05 1017 aa17.57■□□□□ 0.4
PCDHA3-201ENST00000522353 ACTN1P12814 892 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 CUL4AQ13619 759 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 C2orf40Q9H1Z8 148 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 PLEKHA4Q9H4M7 779 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 ORC2Q13416 577 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 C10orf76Q5T2E6 689 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 DNAAF3Q8N9W5 541 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 HGSO14964 777 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 INHBAP08476 426 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 HSPA6P17066 643 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 EPHB1P54762 984 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 APBA1Q02410 837 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 PHLDB2Q86SQ0 1253 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 NDUFAF2Q8N183 169 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 ANGPTL3Q9Y5C1 460 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 CAPN12Q6ZSI9 719 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 SMYD4Q8IYR2 804 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 ELMOD1Q8N336 334 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 TAB3Q8N5C8 712 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 URGCPQ8TCY9 931 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 MXD3Q9BW11 206 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 SNAP23O00161 211 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 KRT1P04264 644 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 SATB1Q01826 763 aa17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 RAB44Q7Z6P3 723 aaPredicted RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 ENOX1Q8TC92 643 aaKnown RBP17.56■□□□□ 0.4
PCDHA3-201ENST00000522353 WDR19Q8NEZ3 1342 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 FAM196BA6NMK8 535 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 TNPO2O14787 897 aaKnown RBP17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 CASQ2O14958 399 aaPredicted RBP17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 CDC25BP30305 580 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 PKP1Q13835 747 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 MAP3K21Q5TCX8 1036 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 FAM71BQ8TC56 605 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 CALN1Q9BXU9 219 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 KLHL14Q9P2G3 628 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 JRKLQ9Y4A0 524 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 ALX1Q15699 326 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 BZW1Q7L1Q6 419 aaKnown RBP17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 GPT2Q8TD30 523 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 ZNF302Q9NR11 478 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 MAN1B1Q9UKM7 699 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 INPP5FQ9Y2H2 1132 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 GFPT2O94808 682 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 NXNQ6DKJ4 435 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 ARHGEF18Q6ZSZ5 1173 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 MGARPQ8TDB4 240 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 USP31Q70CQ4 1352 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 TSPY1Q01534 308 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 HDAC11Q96DB2 347 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 POLIQ9UNA4 740 aa17.55■□□□□ 0.4
PCDHA3-201ENST00000522353 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 NAA25Q14CX7 972 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 STRIP1Q5VSL9 837 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 NAA35Q5VZE5 725 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 KCNV1Q6PIU1 500 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 HUS1O60921 280 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 ZBBXA8MT70 800 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 PADI6Q6TGC4 694 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 SCARA5Q6ZMJ2 495 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 BEST2Q8NFU1 509 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 CCHCR1Q8TD31 782 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 ZNF500O60304 480 aaPredicted RBP17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 ZBED6P86452 979 aa17.54■□□□□ 0.4
PCDHA3-201ENST00000522353 KCTD6Q8NC69 237 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms