RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 PASD1Q8IV76 773 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 ANKRD13AQ8IZ07 590 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 EFHBQ8N7U6 833 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 KIAA1958Q8N8K9 716 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 WDR66Q8TBY9 1149 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 SCYL1Q96KG9 808 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 PUS7Q96PZ0 661 aaKnown RBP5.47□□□□□ -1.53
CD46-216ENST00000490278 EMC7Q9NPA0 242 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 SPTLC3Q9NUV7 552 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 HSPBP1Q9NZL4 362 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 H2AFY2Q9P0M6 372 aaPredicted RBP5.47□□□□□ -1.53
CD46-216ENST00000490278 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 SPO11Q9Y5K1 396 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 PFKLP17858 780 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 SLC9A1P19634 815 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 SDHAP31040 664 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 STAT5AP42229 794 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 ID4P47928 161 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 CDKN1CP49918 316 aaPredicted RBP5.46□□□□□ -1.54
CD46-216ENST00000490278 CDR1P51861 262 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 NCKAP1LP55160 1127 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 NKX3-2P78367 333 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 CACNB2Q08289 660 aaPredicted RBP5.46□□□□□ -1.54
CD46-216ENST00000490278 ATP13A4Q4VNC1 1196 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 RNF219Q5W0B1 726 aaPredicted RBP5.46□□□□□ -1.54
CD46-216ENST00000490278 TEPPQ6URK8 271 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 CD300LDQ6UXZ3 194 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
CD46-216ENST00000490278 MZB1Q8WU39 189 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 ELF4Q99607 663 aaPredicted RBP5.46□□□□□ -1.54
CD46-216ENST00000490278 ACSS2Q9NR19 701 aa5.46□□□□□ -1.54
CD46-216ENST00000490278 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.45□□□□□ -1.54
CD46-216ENST00000490278 N4BP3O15049 544 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 FOXP2O15409 715 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 GPR39O43194 453 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 CYP17A1P05093 508 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 MC3RP41968 323 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 HERVK_113P62684 666 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 CR1LQ2VPA4 569 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 LHFPL2Q6ZUX7 228 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 SPATS2Q86XZ4 545 aaKnown RBP5.45□□□□□ -1.54
CD46-216ENST00000490278 RPUSD2Q8IZ73 545 aaKnown RBP5.45□□□□□ -1.54
CD46-216ENST00000490278 FAM26EQ8N5C1 309 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 KCNN1Q92952 543 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 SGPP1Q9BX95 441 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 FAN1Q9Y2M0 1017 aa5.45□□□□□ -1.54
CD46-216ENST00000490278 ALG1L2C9J202 215 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 PPM1GO15355 546 aaPredicted RBP5.44□□□□□ -1.54
CD46-216ENST00000490278 TGM5O43548 720 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 ULK1O75385 1050 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 C8BP07358 591 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 CYP2C8P10632 490 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 ATF2P15336 505 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 FNTBP49356 437 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 DLG4P78352 724 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 TMPRSS15P98073 1019 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 DBPQ10586 325 aaPredicted RBP5.44□□□□□ -1.54
CD46-216ENST00000490278 CATSPEREQ5SY80 951 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 CD276Q5ZPR3 534 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 B3GNT8Q7Z7M8 397 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 IGDCC3Q8IVU1 814 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 ASB15Q8WXK1 588 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 GCM1Q9NP62 436 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 TOMM22Q9NS69 142 aa5.44□□□□□ -1.54
CD46-216ENST00000490278 PHLDB1Q86UU1 1377 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 RASSF10A6NK89 507 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 MMEP08473 750 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 ENO2P09104 434 aaPredicted RBP5.43□□□□□ -1.54
CD46-216ENST00000490278 IGFBP6P24592 240 aaPredicted RBP5.43□□□□□ -1.54
CD46-216ENST00000490278 PTX3P26022 381 aaPredicted RBP5.43□□□□□ -1.54
CD46-216ENST00000490278 EPHB3P54753 998 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 EVA1CP58658 441 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 SMAD3P84022 425 aaKnown RBP5.43□□□□□ -1.54
CD46-216ENST00000490278 SMAD2Q15796 467 aaKnown RBP5.43□□□□□ -1.54
CD46-216ENST00000490278 DDB1Q16531 1140 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 VASNQ6EMK4 673 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 NECAB2Q7Z6G3 386 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 ZZZ3Q8IYH5 903 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 SMARCC2Q8TAQ2 1214 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 SLC5A5Q92911 643 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 GBP4Q96PP9 640 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 PCDH18Q9HCL0 1135 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 HOMER2Q9NSB8 354 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 SLC5A4Q9NY91 659 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 ARHGAP28Q9P2N2 729 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 ASB1Q9Y576 335 aa5.43□□□□□ -1.54
CD46-216ENST00000490278 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.42□□□□□ -1.54
CD46-216ENST00000490278 ETV2O00321 342 aaPredicted RBP5.42□□□□□ -1.54
CD46-216ENST00000490278 FARP2O94887 1054 aaPredicted RBP5.42□□□□□ -1.54
CD46-216ENST00000490278 AOAHP28039 575 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 LSP1P33241 339 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 SESN3P58005 492 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 PHC1P78364 1004 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 FOXO4P98177 505 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 MESP2Q0VG99 397 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 EPHA7Q15375 998 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 TERF2Q15554 542 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 GPR158Q5T848 1215 aa5.42□□□□□ -1.54
CD46-216ENST00000490278 BROXQ5VW32 411 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms