RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CXCL9Q07325 125 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 C2orf54Q08AI8 447 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 LONRF2Q1L5Z9 754 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 CTAGE6Q86UF2 777 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 CTAGE4Q8IX94 777 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 NEK11Q8NG66 645 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 TRERF1Q96PN7 1200 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 HAUS4Q9H6D7 363 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 ARGLU1Q9NWB6 273 aaPredicted RBP16.34■□□□□ 0.21
SF1-211ENST00000448404 PACSIN2Q9UNF0 486 aaPredicted RBP16.34■□□□□ 0.21
SF1-211ENST00000448404 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
SF1-211ENST00000448404 TISP43B9A030 160 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 SORBS3O60504 671 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 BMS1Q14692 1282 aaKnown RBP16.34■□□□□ 0.21
SF1-211ENST00000448404 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 GMLQ99445 158 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 MRIQ9BWK5 157 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 ZNF341Q9BYN7 854 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 FAM53CQ9NYF3 392 aa16.34■□□□□ 0.21
SF1-211ENST00000448404 ATRNL1Q5VV63 1379 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 AKAP3O75969 853 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 IPO7O95373 1038 aaKnown RBP16.33■□□□□ 0.21
SF1-211ENST00000448404 NAP1L1P55209 391 aaKnown RBP16.33■□□□□ 0.21
SF1-211ENST00000448404 HYIQ5T013 277 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 RDH13Q8NBN7 331 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 MBOAT7Q96N66 472 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.216e-6■■□□□ 11.9
SF1-211ENST00000448404 KDM3AQ9Y4C1 1321 aa16.33■□□□□ 0.21
SF1-211ENST00000448404 EIF3CLB5ME19 914 aaKnown RBP16.33■□□□□ 0.2
SF1-211ENST00000448404 WNT10BO00744 389 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 RPA1P27694 616 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 AP3B2Q13367 1082 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 SPA17Q15506 151 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 LRCH2Q5VUJ6 765 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 SLFN12Q8IYM2 578 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 EIF3CQ99613 913 aaKnown RBP16.33■□□□□ 0.2
SF1-211ENST00000448404 NUP58Q9BVL2 599 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 FUT8Q9BYC5 575 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 ARFGAP3Q9NP61 516 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 TMX2Q9Y320 296 aa16.33■□□□□ 0.2
SF1-211ENST00000448404 LRRN2O75325 713 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 SLITRK3O94933 977 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 KIF5AQ12840 1032 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 SAMD7Q7Z3H4 446 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 LDHDQ86WU2 507 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 SAR1BQ9Y6B6 198 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 H3BQF6 201 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 KRT86O43790 486 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 PHACTR2O75167 634 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 KRT83P78385 493 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 HDAC7Q8WUI4 952 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 ELMO3Q96BJ8 720 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 MS4A14Q96JA4 679 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 RABGAP1Q9Y3P9 1069 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 VIL1P09327 827 aaKnown RBP16.32■□□□□ 0.2
SF1-211ENST00000448404 VAV2P52735 878 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 Q4G0T1 1027 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 HAUS3Q68CZ6 603 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 DLK2Q6UY11 383 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 OTOP1Q7RTM1 612 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 SYT2Q8N9I0 419 aaPredicted RBP16.32■□□□□ 0.2
SF1-211ENST00000448404 CAGE1Q8TC20 777 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 IPO4Q8TEX9 1081 aaKnown RBP16.32■□□□□ 0.2
SF1-211ENST00000448404 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
SF1-211ENST00000448404 SECISBP2LQ93073 1101 aaKnown RBP16.32■□□□□ 0.2
SF1-211ENST00000448404 MYBL2P10244 700 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 MAGEA1P43355 309 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 COBLL1Q53SF7 1204 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 RINT1Q6NUQ1 792 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
SF1-211ENST00000448404 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 EPS15P42566 896 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 FKBP1AP62942 108 aaKnown RBP16.31■□□□□ 0.2
SF1-211ENST00000448404 PSMD2Q13200 908 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 RASA3Q14644 834 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 RAVER2Q9HCJ3 691 aaKnown RBP16.31■□□□□ 0.2
SF1-211ENST00000448404 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
SF1-211ENST00000448404 A0A087X0T9 212 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 GCOM1H8Y6P7 765 aaPredicted RBP16.3■□□□□ 0.2
SF1-211ENST00000448404 RBAK-RBAKDNI3L0D1 243 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 PEX10O60683 326 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 FTCDO95954 541 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 FAM228BP0C875 321 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 POLR2MP0CAP2 368 aa16.3■□□□□ 0.2
SF1-211ENST00000448404 OAS2P29728 719 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms