RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FAHP16930 419 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 FNTBP49356 437 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 SMAD3P84022 425 aaKnown RBP5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 GRIN1Q05586 938 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 LRRC32Q14392 662 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 TERF2Q15554 542 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 SMAD2Q15796 467 aaKnown RBP5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 RGL3Q3MIN7 710 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 PAN2Q504Q3 1202 aaKnown RBP5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 ODR4Q5SWX8 454 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 BROXQ5VW32 411 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 MIB1Q86YT6 1006 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZNF610Q8N9Z0 462 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 ALG3Q92685 438 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 YIPF4Q9BSR8 244 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 HCFC2Q9Y5Z7 792 aa5.91□□□□□ -1.46
HMGB1P16-201ENST00000447155 FOXP2O15409 715 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 PAPLNO95428 1278 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 JUNBP17275 347 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 ITGB5P18084 799 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 CD40P25942 277 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 EPHA7Q15375 998 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 CATSPEREQ5SY80 951 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 SYDE2Q5VT97 1194 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 NBPF11Q86T75 865 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 RASSF3Q86WH2 238 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 AMIGO3Q86WK7 504 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 FAM9AQ8IZU1 332 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 TOE1Q96GM8 510 aaKnown RBP5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZNF552Q9H707 407 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 ZMAT4Q9H898 229 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 NGRNQ9NPE2 291 aaKnown RBP5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 DTLQ9NZJ0 730 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 TRHDEQ9UKU6 1024 aa5.9□□□□□ -1.46
HMGB1P16-201ENST00000447155 ALDH1L1O75891 902 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 PTX3P26022 381 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 VIPR1P32241 457 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 ERVK-21P61565 698 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 ADCY1Q08828 1119 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 ESRP1Q6NXG1 681 aaKnown RBP5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 MPZL3Q6UWV2 235 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 ETV3LQ6ZN32 361 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 TMC6Q7Z403 805 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 NME9Q86XW9 330 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 FAM168AQ92567 244 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 AHCYL2Q96HN2 611 aaKnown RBP5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 C16orf92Q96LL3 132 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 CCDC8Q9H0W5 538 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 HSPBP1Q9NZL4 362 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 NOC2LQ9Y3T9 749 aaKnown RBP5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 SPEF1Q9Y4P9 236 aa5.89□□□□□ -1.47
HMGB1P16-201ENST00000447155 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 LRG1P02750 347 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 MMEP08473 750 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZNF200P98182 395 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 TTF1Q15361 905 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 TEPPQ6URK8 271 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 FRMD7Q6ZUT3 714 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZNF605Q86T29 641 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 ASB15Q8WXK1 588 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 CPA5Q8WXQ8 436 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 JDP2Q8WYK2 163 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 DDX11Q96FC9 970 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 GBP4Q96PP9 640 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZDHHC5Q9C0B5 715 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 BCAS3Q9H6U6 928 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 USP36Q9P275 1121 aaKnown RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 THRAP3Q9Y2W1 955 aaKnown RBP5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 ASB1Q9Y576 335 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 WASHC2AQ641Q2 1341 aa5.88□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZNF503-AS2A6NEH8 195 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 RASSF10A6NK89 507 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 GABRDO14764 452 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 FBXO21O94952 628 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 ASGR2P07307 311 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 AOAHP28039 575 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 NEK2P51955 445 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 EPHB1P54762 984 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 NKX3-2P78367 333 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 DBPQ10586 325 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 ZC3H18Q86VM9 953 aaKnown RBP5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 HIPK4Q8NE63 616 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 E2F7Q96AV8 911 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 LIN37Q96GY3 246 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 SMAD5Q99717 465 aaKnown RBP5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
HMGB1P16-201ENST00000447155 IRS2Q9Y4H2 1338 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 GOLGA6L22H0YM25 854 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 PEX10O60683 326 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 NCAM1P13591 858 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 FBLN1P23142 703 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 STAT5AP42229 794 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 IRAK1P51617 712 aa5.86□□□□□ -1.47
HMGB1P16-201ENST00000447155 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms