RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SMURF1Q9HCE7 757 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 RIC8BQ9NVN3 520 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 ARHGAP20Q9P2F6 1191 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 FTSJ1Q9UET6 329 aa5.4□□□□□ -1.54
HMGB3P23-201ENST00000414981 B4E1Z4 1266 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 IGSF3O75054 1194 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 FBXO21O94952 628 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 RASGRP1O95267 797 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 KNG1P01042 644 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 KRT15P19012 456 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 HERVK_113P62684 666 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 SURF1Q15526 300 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 TRMT10BQ6PF06 316 aaKnown RBP5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 DPP8Q6V1X1 898 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 BRAPQ7Z569 592 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 FERMT3Q86UX7 667 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 SYNPOQ8N3V7 929 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 KLHL36Q8N4N3 616 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 SH3TC2Q8TF17 1288 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 KCND1Q9NSA2 647 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 TMEM260Q9NX78 707 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 NCANO14594 1321 aa5.39□□□□□ -1.55
HMGB3P23-201ENST00000414981 RFPL3O75679 317 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 KLHL18O94889 574 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 IL18BPO95998 194 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 C4BPAP04003 597 aaKnown RBP5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 CELA3BP08861 270 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 CNR2P34972 360 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 PLP2Q04941 152 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 NFATC3Q12968 1075 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 PKN3Q6P5Z2 889 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 FGD2Q7Z6J4 655 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 CLUHP3Q96NS8 147 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 BARX1Q9HBU1 254 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 ZFP69BQ9UJL9 534 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 INVSQ9Y283 1065 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 COQ6Q9Y2Z9 468 aa5.38□□□□□ -1.55
HMGB3P23-201ENST00000414981 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 RAPGEF3O95398 923 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 PLATP00750 562 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 ASLP04424 464 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 GLRBP48167 497 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 ARHGAP44Q17R89 818 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 PLEKHH3Q7Z736 793 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 STPG3Q8N7X2 389 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 DLG3Q92796 817 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 AJUBAQ96IF1 538 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 RBM15Q96T37 977 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 PIF1Q9H611 641 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 GALNT8Q9NY28 637 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 ADAM29Q9UKF5 820 aa5.37□□□□□ -1.55
HMGB3P23-201ENST00000414981 SLC12A8A0AV02 714 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 H0Y858 1186 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 ITGB3P05106 788 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 SEC23AQ15436 765 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 SKOR2Q2VWA4 1001 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 TMEM177Q53S58 311 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 ABHD17CQ6PCB6 329 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 Q6ZUG5 572 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 CXXC5Q7LFL8 322 aaKnown RBP5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 OTOP1Q7RTM1 612 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 DDX53Q86TM3 631 aaKnown RBP5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 NOSTRINQ8IVI9 506 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 IGSF22Q8N9C0 903 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 NUDT10Q8NFP7 164 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 NUDT11Q96G61 164 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 RNPC3Q96LT9 517 aaKnown RBP5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 KATNBL1Q9H079 304 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 KANSL2Q9H9L4 492 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 KCNH7Q9NS40 1196 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 ARHGAP28Q9P2N2 729 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 ZDHHC9Q9Y397 364 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 B3GALT1Q9Y5Z6 326 aa5.36□□□□□ -1.55
HMGB3P23-201ENST00000414981 PPP1R12AO14974 1030 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 B4GALT3O60512 393 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 ZBTB48P10074 688 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 PTGS1P23219 599 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 AOAHP28039 575 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 SDHAP31040 664 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 IGFALSP35858 605 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 TBC1D10BQ4KMP7 808 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 PHF19Q5T6S3 580 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 ZCCHC8Q6NZY4 707 aaKnown RBP5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 KBTBD2Q8IY47 623 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 CISD2Q8N5K1 135 aaKnown RBP5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 WNK4Q96J92 1243 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 TACO1Q9BSH4 297 aaKnown RBP5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 BTBD7Q9P203 1132 aa5.35□□□□□ -1.55
HMGB3P23-201ENST00000414981 SCDO00767 359 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 KCNK3O14649 394 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 CUTAO60888 179 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 ASMTLO95671 621 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 POLD1P28340 1107 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 FLT3P36888 993 aa5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 MECP2P51608 486 aaKnown RBP5.34□□□□□ -1.55
HMGB3P23-201ENST00000414981 PPP2CBP62714 309 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms