RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ITIH3Q06033 890 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 BBS5Q8N3I7 341 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 UBLCP1Q8WVY7 318 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 MYOZ2Q9NPC6 264 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 RNF14Q9UBS8 474 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 HSPA6P17066 643 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 TUFT1Q9NNX1 390 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 PLCB1Q9NQ66 1216 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 ARL1P40616 181 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 GTF2A1P52655 376 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 CATSPER4Q7RTX7 472 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 COL23A1Q86Y22 540 aaPredicted RBP18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 ANKRD13AQ8IZ07 590 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 SORBS3O60504 671 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 LONRF2Q1L5Z9 754 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 CPLX4Q7Z7G2 160 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 AFAP1L2Q8N4X5 818 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 ZNF302Q9NR11 478 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 PSMD14O00487 310 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 PFDN6O15212 129 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 RNASELQ05823 741 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 CEP55Q53EZ4 464 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 SPTLC3Q9NUV7 552 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 NWD1Q149M9 1564 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 TYW5A2RUC4 315 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 IPO5O00410 1097 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 PADI6Q6TGC4 694 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 EEPD1Q7L9B9 569 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 PAIP2Q9BPZ3 127 aaKnown RBP18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 DONSONQ9NYP3 566 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 SLC12A6Q9UHW9 1150 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 DAAM1Q9Y4D1 1078 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 PCDHA10Q9Y5I2 948 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 MEIS1O00470 390 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 RSAD2Q8WXG1 361 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 RAD54LQ92698 747 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 MSTO1Q9BUK6 570 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 GMPSP49915 693 aaPredicted RBP18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 AP3M2P53677 418 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 ZBTB16Q05516 673 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 CUL4BQ13620 913 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 USP17L6PQ6QN14 398 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 SMC6Q96SB8 1091 aa18.23■□□□□ 0.51
PCDHA13-202ENST00000409494 ERCC3P19447 782 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 CTTNQ14247 550 aaKnown RBP18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 RINT1Q6NUQ1 792 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 SARM1Q6SZW1 724 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 CHST13Q8NET6 341 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 TRIM7Q9C029 511 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 PFASO15067 1338 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 ESYT2A0FGR8 921 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 TFAMQ00059 246 aaKnown RBP18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 RAB3IL1Q8TBN0 382 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 RABGGTAQ92696 567 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 EPSTI1Q96J88 318 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 MAP3K20Q9NYL2 800 aaKnown RBP18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 NDUFB10O96000 172 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 SRGNP10124 158 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 CETPP11597 493 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 TBC1D31Q96DN5 1066 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 ABCB4P21439 1286 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 RFX1P22670 979 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 ATP2C1P98194 919 aaPredicted RBP18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 B4GALNT4Q76KP1 1039 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 XXYLT1Q8NBI6 393 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 SELENOSQ9BQE4 189 aa18.22■□□□□ 0.51
PCDHA13-202ENST00000409494 FAM196BA6NMK8 535 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 NDUFAB1O14561 156 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 CDC27P30260 824 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 EFNA5P52803 228 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 ZDHHC15Q96MV8 337 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 KIAA1841Q6NSI8 718 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 GPATCH11Q8N954 259 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 CCSER1Q9C0I3 900 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 KCND2Q9NZV8 630 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 KCNH4Q9UQ05 1017 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 A6NJR5 290 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 HMGCS2P54868 508 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 NDST4Q9H3R1 872 aa18.21■□□□□ 0.51
PCDHA13-202ENST00000409494 SESTD1Q86VW0 696 aa18.21■□□□□ 0.5
PCDHA13-202ENST00000409494 MTRQ99707 1265 aa18.21■□□□□ 0.5
PCDHA13-202ENST00000409494 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 NMT2O60551 498 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 RASA1P20936 1047 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 PEX3P56589 373 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 PPFIA1Q13136 1202 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 ODF2LQ9ULJ1 636 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 MAP2P11137 1827 aaKnown RBP18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 CLDN3O15551 220 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 ANGEL2Q5VTE6 544 aaKnown RBP18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 APOL6Q9BWW8 343 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 EHD4Q9H223 541 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 PSMB7Q99436 277 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 BPIFA3Q9BQP9 254 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 KCNK9Q9NPC2 374 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 HOMER3Q9NSC5 361 aa18.2■□□□□ 0.5
PCDHA13-202ENST00000409494 SAMD15Q9P1V8 674 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms