RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 EIF2AK1Q9BQI3 630 aaKnown RBP18.54■□□□□ 0.56
NUP50-203ENST00000407019 ACBD3Q9H3P7 528 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 LUC7LQ9NQ29 371 aaKnown RBP18.54■□□□□ 0.56
NUP50-203ENST00000407019 HDAC9Q9UKV0 1011 aa18.54■□□□□ 0.56
NUP50-203ENST00000407019 CALUO43852 315 aaPredicted RBP18.53■□□□□ 0.56
NUP50-203ENST00000407019 TBCAO75347 108 aaKnown RBP18.53■□□□□ 0.56
NUP50-203ENST00000407019 EYA4O95677 639 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 MYBP10242 640 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 ECE1P42892 770 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 KCNH2Q12809 1159 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 ZNF572Q7Z3I7 529 aaPredicted RBP18.53■□□□□ 0.56
NUP50-203ENST00000407019 FRMD5Q7Z6J6 570 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 RNF10Q8N5U6 811 aaKnown RBP18.53■□□□□ 0.56
NUP50-203ENST00000407019 KCTD17Q8N5Z5 321 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 CYP2W1Q8TAV3 490 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 NOX5Q96PH1 765 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 GANQ9H2C0 597 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 BHMT2Q9H2M3 363 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 RABGAP1Q9Y3P9 1069 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 IGLV3-22A0A075B6J6 115 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 TCP10L2B9ZVM9 353 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 PDXKO00764 312 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 RAPGEF1Q13905 1077 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 CCDC70Q6NSX1 233 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 OSBPL9Q96SU4 736 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 GOPCQ9HD26 462 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 ARMCX3Q9UH62 379 aaPredicted RBP18.53■□□□□ 0.56
NUP50-203ENST00000407019 SALL4Q9UJQ4 1053 aa18.53■□□□□ 0.56
NUP50-203ENST00000407019 ATAD5Q96QE3 1844 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 EML1O00423 815 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 PRPF6O94906 941 aaKnown RBP18.52■□□□□ 0.56
NUP50-203ENST00000407019 HOXD13P35453 343 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 APBA1Q02410 837 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 ITIH3Q06033 890 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 ASIC2Q16515 512 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 BMT2Q1RMZ1 405 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 ANKRD13CQ8N6S4 541 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 COG1Q8WTW3 980 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 RUSC1Q9BVN2 902 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 AIPL1Q9NZN9 384 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 TMX2Q9Y320 296 aa18.52■□□□□ 0.56
NUP50-203ENST00000407019 ERICH4A6NGS2 130 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 RSPH10B2B2RC85 870 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 AFPP02771 609 aaKnown RBP18.51■□□□□ 0.55
NUP50-203ENST00000407019 RSPH10BP0C881 870 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 KIAA1755Q5JYT7 1200 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 NFRKBQ6P4R8 1299 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 MMGT1Q8N4V1 131 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 ACER1Q8TDN7 264 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
NUP50-203ENST00000407019 LRRIQ3A6PVS8 624 aaPredicted RBP18.51■□□□□ 0.55
NUP50-203ENST00000407019 CFBP00751 764 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 KLHL30Q0D2K2 578 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 VIPAS39Q9H9C1 493 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 TUFT1Q9NNX1 390 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 RGL1Q9NZL6 768 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 TSKSQ9UJT2 592 aa18.51■□□□□ 0.55
NUP50-203ENST00000407019 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 CCDC66A2RUB6 948 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 GCOM1H8Y6P7 765 aaPredicted RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 BUB1O43683 1085 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 GCNT3O95395 438 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 POLR2MP0CAP2 368 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 GAP43P17677 238 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 TNNT3P45378 269 aaPredicted RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 NAP1L1P55209 391 aaKnown RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 SLC18A3Q16572 532 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 TBC1D5Q92609 795 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 WDR18Q9BV38 432 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 PLCB1Q9NQ66 1216 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 ASTN1O14525 1302 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 NR3C1P04150 777 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 XRCC5P13010 732 aaKnown RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 RPL13P26373 211 aaKnown RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 HSP90B2PQ58FF3 399 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 CCDC181Q5TID7 509 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 KLHDC7AQ5VTJ3 777 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 LRCH2Q5VUJ6 765 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 RSBN1LQ6PCB5 846 aaPredicted RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 CCDC174Q6PII3 467 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 FAM151AQ8WW52 585 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 EHMT1Q9H9B1 1298 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 METTL14Q9HCE5 456 aaKnown RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 OLFML3Q9NRN5 406 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 ZNF70Q9UC06 446 aaPredicted RBP18.5■□□□□ 0.55
NUP50-203ENST00000407019 ZBTB21Q9ULJ3 1066 aa18.5■□□□□ 0.55
NUP50-203ENST00000407019 SLC16A3O15427 465 aaKnown RBP18.49■□□□□ 0.55
NUP50-203ENST00000407019 NCK2O43639 380 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 C21orf2O43822 256 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 EPB41P11171 864 aaKnown RBP18.49■□□□□ 0.55
NUP50-203ENST00000407019 ARID5AQ03989 594 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 CTTNQ14247 550 aaKnown RBP18.49■□□□□ 0.55
NUP50-203ENST00000407019 RINT1Q6NUQ1 792 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 SPATA4Q8NEY3 305 aa18.49■□□□□ 0.55
NUP50-203ENST00000407019 CHURC1Q8WUH1 139 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms