RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PLCG1P19174 1290 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 TRHRP34981 398 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-204ENST00000396464 ERVK-21P61565 698 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-204ENST00000396464 WDR45BQ5MNZ6 344 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 IQSEC1Q6DN90 963 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 UNC5AQ6ZN44 842 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 PNMA8AQ86V59 439 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-204ENST00000396464 MYLK4Q86YV6 388 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-204ENST00000396464 SLC41A1Q8IVJ1 513 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 SCUBE1Q8IWY4 988 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 LILRA2Q8N149 483 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 OR8H2Q8N162 312 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 FAM13CQ8NE31 585 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 OR2W6PQ8NHA6 318 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 CCT6BQ92526 530 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 RNF32Q9H0A6 362 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 DUSP15Q9H1R2 295 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-204ENST00000396464 RSAD1Q9HA92 442 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 SLC52A2Q9HAB3 445 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 CD320Q9NPF0 282 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 TRMT13Q9NUP7 481 aaKnown RBP5.93□□□□□ -1.46
GABPB1-204ENST00000396464 NISCHQ9Y2I1 1504 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 PTPN22Q9Y2R2 807 aa5.93□□□□□ -1.46
GABPB1-204ENST00000396464 FITM1A5D6W6 292 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 CBFA2T2O43439 604 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 C6orf222P0C671 652 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-204ENST00000396464 RHCEP18577 417 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 LINC00310P59036 64 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 RHDQ02161 417 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 LRRFIP1Q32MZ4 808 aaKnown RBP5.92□□□□□ -1.46
GABPB1-204ENST00000396464 SV2CQ496J9 727 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 CCDC92Q53HC0 331 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-204ENST00000396464 FAM180BQ6P0A1 224 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 CHST15Q7LFX5 561 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-204ENST00000396464 AMIGO3Q86WK7 504 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 SPPL2CQ8IUH8 684 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 CMTR2Q8IYT2 770 aaKnown RBP5.92□□□□□ -1.46
GABPB1-204ENST00000396464 SPATA5Q8NB90 893 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 NAXEQ8NCW5 288 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 GIMAP8Q8ND71 665 aaPredicted RBP5.92□□□□□ -1.46
GABPB1-204ENST00000396464 DNAJB8Q8NHS0 232 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 CYB5D2Q8WUJ1 264 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 SGCZQ96LD1 299 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 Q96M66 194 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 PPM1MQ96MI6 270 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 TSPAN18Q96SJ8 248 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 NELL2Q99435 816 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 C19orf44Q9H6X5 657 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 C1orf112Q9NSG2 853 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 RRN3Q9NYV6 651 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 DNM3Q9UQ16 869 aa5.92□□□□□ -1.46
GABPB1-204ENST00000396464 A6NNZ2 444 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 B8ZZF3 427 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 TLR5O60602 858 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 INHBBP09529 407 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 CHKAP35790 457 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 IGFALSP35858 605 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 TM4SF4P48230 202 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 HSP90AA2PQ14568 343 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 TAF11Q15544 211 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 CLEC16AQ2KHT3 1053 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 GAB4Q2WGN9 574 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 TTLL10Q6ZVT0 673 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 ZNF605Q86T29 641 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 TSPYL5Q86VY4 417 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 IRF2BP1Q8IU81 584 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 DTWD2Q8NBA8 298 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 ACRBPQ8NEB7 543 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 GSTCDQ8NEC7 633 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 RSPH1Q8WYR4 309 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 NELL1Q92832 810 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 ACSF2Q96CM8 615 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 GCC1Q96CN9 775 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 HSPBAP1Q96EW2 488 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 GPR62Q9BZJ7 368 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 VTA1Q9NP79 307 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 NMRK2Q9NPI5 230 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 RASSF1Q9NS23 344 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 GPR52Q9Y2T5 361 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 SLC4A7Q9Y6M7 1214 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 WASHC2AQ641Q2 1341 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 hCG_1642624A0A1W2PR95 340 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 TPP1O14773 563 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 CAPN3P20807 821 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 GRK6P43250 576 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 DUSP4Q13115 394 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 ODF1Q14990 250 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 CFAP100Q494V2 611 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 B3GNT9Q6UX72 402 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 CATIPQ7Z7H3 387 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 FAM43AQ8N2R8 423 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 NUP88Q99567 741 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 ASCC2Q9H1I8 757 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-204ENST00000396464 KMT5AQ9NQR1 393 aa5.91□□□□□ -1.46
GABPB1-204ENST00000396464 SMC4Q9NTJ3 1288 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms