RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 COL4A3BPQ9Y5P4 624 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 PRLRP16471 622 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 SLC18A3Q16572 532 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 PPP4R3AQ6IN85 833 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 ZNF571Q7Z3V5 609 aaPredicted RBP17.85■□□□□ 0.45
PHTF1-205ENST00000393357 FAXDC2Q96IV6 333 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 XPO6Q96QU8 1125 aaKnown RBP17.85■□□□□ 0.45
PHTF1-205ENST00000393357 CCSER1Q9C0I3 900 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 AGAP1Q9UPQ3 857 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 RGS16O15492 202 aaPredicted RBP17.85■□□□□ 0.45
PHTF1-205ENST00000393357 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
PHTF1-205ENST00000393357 PPP2R5BQ15173 497 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 ECM1Q16610 540 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 CENPPQ6IPU0 288 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 FMO2Q99518 471 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 BLOC1S4Q9NUP1 217 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 SEC63Q9UGP8 760 aaKnown RBP17.85■□□□□ 0.45
PHTF1-205ENST00000393357 FLT1P17948 1338 aa17.85■□□□□ 0.45
PHTF1-205ENST00000393357 KIF1CO43896 1103 aaKnown RBP17.84■□□□□ 0.45
PHTF1-205ENST00000393357 UBOX5O94941 541 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 PDHA1P08559 390 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 CREB1P16220 341 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 ECHS1P30084 290 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 TRIM28Q13263 835 aaKnown RBP17.84■□□□□ 0.45
PHTF1-205ENST00000393357 SLC29A2Q14542 456 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 PLS1Q14651 629 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 KRT79Q5XKE5 535 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 ZSCAN29Q8IWY8 852 aaPredicted RBP17.84■□□□□ 0.45
PHTF1-205ENST00000393357 ZNF512BQ96KM6 892 aaPredicted RBP17.84■□□□□ 0.45
PHTF1-205ENST00000393357 ACTR5Q9H9F9 607 aaPredicted RBP17.84■□□□□ 0.45
PHTF1-205ENST00000393357 PNMA3Q9UL41 463 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 A6NNZ2 444 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 TUBB8Q3ZCM7 444 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 CUL5Q93034 780 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 ZCWPW1Q9H0M4 648 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 PLCB1Q9NQ66 1216 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 KIAA1024Q9UPX6 916 aa17.84■□□□□ 0.45
PHTF1-205ENST00000393357 A0A1W2PQJ5 194 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 CCDC189A1A4V9 331 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 ACSL3O95573 720 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 STAT3P40763 770 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 KCNH2Q12809 1159 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 TRIP13Q15645 432 aaPredicted RBP17.83■□□□□ 0.45
PHTF1-205ENST00000393357 ARHGAP44Q17R89 818 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 LRRC47Q8N1G4 583 aaKnown RBP17.83■□□□□ 0.45
PHTF1-205ENST00000393357 TATDN2Q93075 761 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 FGFR1OP2Q9NVK5 253 aa17.83■□□□□ 0.45
PHTF1-205ENST00000393357 CCT8L1PA6NM43 557 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 STXBP3O00186 592 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 SESN3P58005 492 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 FAM26FQ5R3K3 315 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 BAZ2AQ9UIF9 1905 aaKnown RBP17.83■□□□□ 0.44
PHTF1-205ENST00000393357 LRRN2O75325 713 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 SLURP2P0DP57 97 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 DRD4P21917 467 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 KCNJ1P48048 391 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 TBC1D10BQ4KMP7 808 aaPredicted RBP17.83■□□□□ 0.44
PHTF1-205ENST00000393357 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.44
PHTF1-205ENST00000393357 PLCG2P16885 1265 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 NR2F2P24468 414 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 SLC16A2P36021 539 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 FBXO25Q8TCJ0 367 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
PHTF1-205ENST00000393357 KLHL29Q96CT2 875 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 SEMA4AQ9H3S1 761 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 ECM29Q5VYK3 1845 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 IGF2BP3O00425 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHTF1-205ENST00000393357 FKBP3Q00688 224 aaKnown RBP17.82■□□□□ 0.44
PHTF1-205ENST00000393357 COASYQ13057 564 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 ASTE1Q2TB18 679 aaPredicted RBP17.82■□□□□ 0.44
PHTF1-205ENST00000393357 GNPTABQ3T906 1256 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 NUGGCQ68CJ6 796 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 LRRC55Q6ZSA7 311 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 TMC3Q7Z5M5 1100 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 GLYCTKQ8IVS8 523 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
PHTF1-205ENST00000393357 CCT6BQ92526 530 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 PNMA5Q96PV4 448 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 C7orf25Q9BPX7 421 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 TSKSQ9UJT2 592 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
PHTF1-205ENST00000393357 H0YGN5 161 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 EVI5O60447 810 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 FGFR1OPO95684 399 aaKnown RBP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 LONRF1Q17RB8 773 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 THEMIS2Q5TEJ8 643 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 ARMC3Q5W041 872 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 DENND2CQ68D51 928 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 PHLDB2Q86SQ0 1253 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 ERICH1Q86X53 443 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 PARD3BQ8TEW8 1205 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 ARHGEF10LQ9HCE6 1279 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 NFS1Q9Y697 457 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 F8VZ95 297 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 ATRNO75882 1429 aa17.81■□□□□ 0.44
PHTF1-205ENST00000393357 SARNPP82979 210 aaKnown RBP17.81■□□□□ 0.44
PHTF1-205ENST00000393357 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms