RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SLC27A3Q5K4L6 730 aa12.02□□□□□ -0.48
BEST1-201ENST00000378043 IRF2BP2Q7Z5L9 587 aa12.02□□□□□ -0.48
BEST1-201ENST00000378043 TSEN2Q8NCE0 465 aaKnown RBP12.02□□□□□ -0.48
BEST1-201ENST00000378043 PACSIN2Q9UNF0 486 aaPredicted RBP12.02□□□□□ -0.48
BEST1-201ENST00000378043 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.48
BEST1-201ENST00000378043 COL11A2P13942 1736 aaPredicted RBP12.02□□□□□ -0.48
BEST1-201ENST00000378043 OPLAHO14841 1288 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 CETN3O15182 167 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 GLI1P08151 1106 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 RPA1P27694 616 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 PAFAH1B1P43034 410 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 KLHL30Q0D2K2 578 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 AP3B2Q13367 1082 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 KIAA0753Q2KHM9 967 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 MEI1Q5TIA1 1274 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 PPP4R3CPQ6ZMV5 832 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 SFR1Q86XK3 245 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 DBNDD1Q9H9R9 158 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 POLD4Q9HCU8 107 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 SPATA31A6Q5VVP1 1343 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 ZSCAN5CA6NGD5 496 aaPredicted RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 RSPH10B2B2RC85 870 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 F5H6K3 240 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 RSPH10BP0C881 870 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 POLD1P28340 1107 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 TNFRSF8P28908 595 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 JAG1P78504 1218 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 PTK2Q05397 1052 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 KLRC3Q07444 240 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 KNOP1Q1ED39 458 aaKnown RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 Q4G0T1 1027 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 CFAP221Q4G0U5 840 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 C8orf74Q6P047 294 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 TATDN1Q6P1N9 297 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 KIAA0825Q8IV33 1275 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 CYP2W1Q8TAV3 490 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 SH3GL2Q99962 352 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.02□□□□□ -0.49
BEST1-201ENST00000378043 CWC15Q9P013 229 aaKnown RBP12.02□□□□□ -0.49
BEST1-201ENST00000378043 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 TSKSQ9UJT2 592 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 HDAC9Q9UKV0 1011 aa12.02□□□□□ -0.49
BEST1-201ENST00000378043 GRID2IPA4D2P6 1211 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 IVLP07476 585 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 MYBP10242 640 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 DNA2P51530 1060 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 EPHB4P54760 987 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 USH1GQ495M9 461 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 SRLQ86TD4 932 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 TBX3O15119 743 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 SHOX2O60902 331 aaPredicted RBP12.01□□□□□ -0.49
BEST1-201ENST00000378043 AKAP3O75969 853 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 UCHL3P15374 230 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 NPR1P16066 1061 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 SREBF1P36956 1147 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 KCNA1Q09470 495 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 ASIC2Q16515 512 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 EMBQ6PCB8 327 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 ZNF571Q7Z3V5 609 aaPredicted RBP12.01□□□□□ -0.49
BEST1-201ENST00000378043 FRMD5Q7Z6J6 570 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 DNAAF5Q86Y56 855 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
BEST1-201ENST00000378043 IDI2Q9BXS1 227 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 RNF14Q9UBS8 474 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 FEZ2Q9UHY8 353 aaPredicted RBP12.01□□□□□ -0.49
BEST1-201ENST00000378043 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
BEST1-201ENST00000378043 MYO1CO00159 1063 aa12□□□□□ -0.49
BEST1-201ENST00000378043 TRIM66O15016 1216 aa12□□□□□ -0.49
BEST1-201ENST00000378043 MSH4O15457 936 aa12□□□□□ -0.49
BEST1-201ENST00000378043 GDF11O95390 407 aa12□□□□□ -0.49
BEST1-201ENST00000378043 NDUFB10O96000 172 aa12□□□□□ -0.49
BEST1-201ENST00000378043 PON1P27169 355 aa12□□□□□ -0.49
BEST1-201ENST00000378043 MMP14P50281 582 aa12□□□□□ -0.49
BEST1-201ENST00000378043 CYP4A11Q02928 519 aa12□□□□□ -0.49
BEST1-201ENST00000378043 ICA1Q05084 483 aa12□□□□□ -0.49
BEST1-201ENST00000378043 CAVIN3Q969G5 261 aa12□□□□□ -0.49
BEST1-201ENST00000378043 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
BEST1-201ENST00000378043 PLEKHA4Q9H4M7 779 aa12□□□□□ -0.49
BEST1-201ENST00000378043 PLCB1Q9NQ66 1216 aa12□□□□□ -0.49
BEST1-201ENST00000378043 GDF3Q9NR23 364 aa12□□□□□ -0.49
BEST1-201ENST00000378043 ARMCX3Q9UH62 379 aaPredicted RBP12□□□□□ -0.49
BEST1-201ENST00000378043 AJAP1Q9UKB5 411 aaPredicted RBP12□□□□□ -0.49
BEST1-201ENST00000378043 AFF2P51816 1311 aa12□□□□□ -0.49
BEST1-201ENST00000378043 ESYT3A0FGR9 886 aa12□□□□□ -0.49
BEST1-201ENST00000378043 GOLGA6CA6NDK9 693 aa12□□□□□ -0.49
BEST1-201ENST00000378043 EML1O00423 815 aa12□□□□□ -0.49
BEST1-201ENST00000378043 GOLGA6DP0CG33 693 aa12□□□□□ -0.49
BEST1-201ENST00000378043 HOXA13P31271 388 aaPredicted RBP12□□□□□ -0.49
BEST1-201ENST00000378043 EPS15P42566 896 aa12□□□□□ -0.49
BEST1-201ENST00000378043 CARSP49589 748 aaKnown RBP12□□□□□ -0.49
BEST1-201ENST00000378043 CASP4P49662 377 aa12□□□□□ -0.49
BEST1-201ENST00000378043 GLE1Q53GS7 698 aaKnown RBP12□□□□□ -0.49
BEST1-201ENST00000378043 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms