RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FERP16591 822 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 TRIM9Q9C026 710 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 KCNQ5Q9NR82 932 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 PARP2Q9UGN5 583 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 POLRMTO00411 1230 aaKnown RBP19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 WHAMMP3Q1A5X7 153 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 SARM1Q6SZW1 724 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 JPH2Q9BR39 696 aaPredicted RBP19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 MYOM1P52179 1685 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 TCRBV5S4A2TA0A5A2 114 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 DDTLA6NHG4 134 aaPredicted RBP19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 GCLMP48507 274 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 OGFRQ9NZT2 677 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 HESX1Q9UBX0 185 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
PTPDC1-202ENST00000375360 MFAP3LO75121 409 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 NFX1Q12986 1120 aaKnown RBP19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 MICALCLQ6ZW33 695 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 FAM76AQ8TAV0 307 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 TSNARE1Q96NA8 513 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 NUB1Q9Y5A7 615 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 MYO1FO00160 1098 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 NR3C1P04150 777 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 COG2Q14746 738 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 CPLX4Q7Z7G2 160 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 NBPF11Q86T75 865 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 DHX40Q8IX18 779 aaKnown RBP19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 ACAD9Q9H845 621 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 CDC23Q9UJX2 597 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 SYNJ2BP-COX16A0A087WUM0 186 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 P4HBP07237 508 aaKnown RBP19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 YWHAEP62258 255 aaKnown RBP19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 CYFIP1Q7L576 1253 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 C7orf31Q8N865 590 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 UHMK1Q8TAS1 419 aaKnown RBP19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 COX16Q9P0S2 106 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 ARL1P40616 181 aaPredicted RBP19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 ZNF394Q53GI3 561 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 KAZNQ674X7 775 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 SLC16A10Q8TF71 515 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 FAM169AQ9Y6X4 670 aa19.55■□□□□ 0.72
PTPDC1-202ENST00000375360 MOCS3O95396 460 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 SPOUT1Q5T280 376 aaKnown RBP19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 BSPRYQ5W0U4 402 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 RASGRP2Q7LDG7 609 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 ARFGAP2Q8N6H7 521 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 GPR161Q8N6U8 529 aaKnown RBP19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 AGBL1Q96MI9 1066 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 NACA2Q9H009 215 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 MAD2L2Q9UI95 211 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 GOLGA6BA6NDN3 693 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 KIF11P52732 1056 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 FMR1Q06787 632 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 KCNH2Q12809 1159 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 PAK2Q13177 524 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 BZW2Q9Y6E2 419 aaKnown RBP19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 LGALS16A8MUM7 142 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 GOLGA8SH3BPF8 625 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 ABL1P00519 1130 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 KRT76Q01546 638 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 SCARA5Q6ZMJ2 495 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 ZNF653Q96CK0 615 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 MED10Q9BTT4 135 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 CALCOCO1Q9P1Z2 691 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 SNX16P57768 344 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 VGLL2Q8N8G2 317 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 MSTO1Q9BUK6 570 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 CCSER1Q9C0I3 900 aa19.54■□□□□ 0.72
PTPDC1-202ENST00000375360 THAP12O43422 761 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 JAK3P52333 1124 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 STK4Q13043 487 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 NBPF9Q3BBW0 867 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 ZKSCAN4Q969J2 545 aaPredicted RBP19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 ZMYND12Q9H0C1 365 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 ZNF233A6NK53 670 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 ZNF280CQ8ND82 737 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 NWD1Q149M9 1564 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 DENND3A2RUS2 1198 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 ATP2A2P16615 1042 aaKnown RBP19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 CXCL9Q07325 125 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 SEC23AQ15436 765 aa19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 ALKBH5Q6P6C2 394 aaKnown RBP19.53■□□□□ 0.72
PTPDC1-202ENST00000375360 NMT1P30419 496 aaKnown RBP19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 KNOP1Q1ED39 458 aaKnown RBP19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 ANKRD40Q6AI12 368 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 LRRC45Q96CN5 670 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 GAS8O95995 478 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 LMNB1P20700 586 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 GRIK5Q16478 980 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 SLC17A8Q8NDX2 589 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 TTC26A0AVF1 554 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 CAPN9O14815 690 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 TOGARAM2Q6ZUX3 1019 aa19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 STMN4Q9H169 189 aaPredicted RBP19.52■□□□□ 0.72
PTPDC1-202ENST00000375360 EFCAB8A8MWE9 144 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms