RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 BPHLQ86WA6 291 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 MCATQ8IVS2 390 aaKnown RBP2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 SCUBE1Q8IWY4 988 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 SMURF1Q9HCE7 757 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 PRDM11Q9NQV5 511 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 CYP8B1Q9UNU6 501 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 USP20Q9Y2K6 914 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARID4BQ4LE39 1312 aaPredicted RBP2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 TJP1Q07157 1748 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 REV3LO60673 3130 aa2.35□□□□□ -2.03
SMARCAD1-202ENST00000359052 H3BML4 177 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GRM6O15303 877 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SH3BP5O60239 455 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 FOSP01100 380 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 TIMP2P16035 220 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 FUT4P22083 530 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 HOXC12P31275 282 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 MC4RP32245 332 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ACSL1P33121 698 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 KRT2P35908 639 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 DOK7Q18PE1 504 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 KAZNQ674X7 775 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 TMEM132EQ6IEE7 984 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 FASTKD5Q7L8L6 764 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SESTD1Q86VW0 696 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 MRPL41Q8IXM3 137 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 OR8H2Q8N162 312 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 WDR89Q96FK6 387 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 C1orf74Q96LT6 269 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ACO2Q99798 780 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 TMEFF2Q9UIK5 374 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SSH2Q76I76 1423 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SCN11AQ9UI33 1791 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 FAM90A20PA6NIJ5 464 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 BACH1O14867 736 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 DGAT1O75907 488 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SIX3O95343 332 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GSNP06396 782 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GLI1P08151 1106 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 RLBP1P12271 317 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 RPS6KB1P23443 525 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GABREP78334 506 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 NUCB1Q02818 461 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 C17orf67Q0P5P2 114 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 JAKMIP3Q5VZ66 844 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZCCHC8Q6NZY4 707 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 THEMISQ8N1K5 641 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 TEX19Q8NA77 164 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 NKD1Q969G9 470 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GPATCH1Q9BRR8 931 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 PRR14Q9BWN1 585 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ARHGAP28Q9P2N2 729 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 FETUBQ9UGM5 382 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ITGB4P16144 1822 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZNF335Q9H4Z2 1342 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 UTRNP46939 3433 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GPR75-ASB3A0A0A6YYF3 556 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 F6X3S4 739 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 TGFB1I1O43294 461 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 NBNO60934 754 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 CYP21A2P08686 494 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SDHAP31040 664 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 CYP2C19P33261 490 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 PPP2R2AP63151 447 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 NFKB2Q00653 900 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 LAPTM5Q13571 262 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZNF267Q14586 743 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SETDB1Q15047 1291 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 JMJD6Q6NYC1 403 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 LILRA3Q8N6C8 439 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 ZNF526Q8TF50 670 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 COA7Q96BR5 231 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 RBM18Q96H35 190 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 PPP1R16BQ96T49 567 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 GTPBP4Q9BZE4 634 aaKnown RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 CD248Q9HCU0 757 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 MYO1AQ9UBC5 1043 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 PCDHB14Q9Y5E9 798 aa2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 SOS2Q07890 1332 aaPredicted RBP2.34□□□□□ -2.03
SMARCAD1-202ENST00000359052 FRMPD3Q5JV73 1810 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 IGF2BP3O00425 579 aaKnown RBP eCLIP2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 PPP1R11O60927 126 aaPredicted RBP2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 INMTO95050 263 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 COPAP53621 1224 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 TEKQ02763 1124 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 MINDY4Q4G0A6 757 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 FAM182BQ5T319 152 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 PPP1R26Q5T8A7 1209 aaPredicted RBP2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 ZBTB37Q5TC79 503 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 TMC1Q8TDI8 760 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 ADAMTS15Q8TE58 950 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 POF1BQ8WVV4 589 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 RSAD2Q8WXG1 361 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 KCNH8Q96L42 1107 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 GHITMQ9H3K2 345 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 ABHD16BQ9H3Z7 469 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 ABCC5O15440 1437 aa2.34□□□□□ -2.04
SMARCAD1-202ENST00000359052 ARAP2Q8WZ64 1704 aa2.33□□□□□ -2.04
SMARCAD1-202ENST00000359052 HIP1RO75146 1068 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms