RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 LRRC41Q15345 812 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 SHHQ15465 462 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 NBPF20Q3BBV1 942 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 RCSD1Q6JBY9 416 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 CATSPERGQ6ZRH7 1159 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PRRT2Q7Z6L0 340 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 USP37Q86T82 979 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 STAG1Q8WVM7 1258 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 IDI2Q9BXS1 227 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 TLE6Q9H808 572 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PPP1R9AQ9ULJ8 1098 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 AOX1Q06278 1338 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 SBF1O95248 1867 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CCDC169A6NNP5 214 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 RSPH10B2B2RC85 870 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 GAS7O60861 476 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 RSPH10BP0C881 870 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 STAG3L1P0CL83 205 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 MARCKSP29966 332 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 ADD2P35612 726 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PTH1RQ03431 593 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 UBE3CQ15386 1083 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PRR16Q569H4 304 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 C1orf228Q6PIY5 440 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 YAF2Q8IY57 180 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PGBD3Q8N328 593 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 UPF3BQ9BZI7 483 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PRG3Q9Y2Y8 225 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PCDHB7Q9Y5E2 793 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 FAM237AA0A1B0GTK4 181 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 RPS6KA5O75582 802 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CABYRO75952 493 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 SRGAP2CP0DJJ0 459 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 FDPSP14324 419 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TAL1P17542 331 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 ATP5JP18859 108 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 IFRD2Q12894 506 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NCAPHQ15003 741 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 LETM2Q2VYF4 491 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 METTL3Q86U44 580 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PLA2G4DQ86XP0 818 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PGBD1Q96JS3 809 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 OCSTAMPQ9BR26 566 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TXNRD2Q9NNW7 524 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NRBP2Q9NSY0 501 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 FAM217BQ9NTX9 383 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 RBPJLQ9UBG7 517 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 DBR1Q9UK59 544 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PATJQ8NI35 1801 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PFASO15067 1338 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 BRWD1Q9NSI6 2320 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 C17orf102A2RUQ5 167 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 RFXAPO00287 272 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 VWA5AO00534 786 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 FDX1P10109 184 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CHMLP26374 656 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CDR1P51861 262 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 RPS6P62753 249 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CEBPZQ03701 1054 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NEDD9Q14511 834 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 IQCB1Q15051 598 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 SLC35G1Q2M3R5 365 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 MTERF2Q49AM1 385 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 ODR4Q5SWX8 454 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 IER5Q5VY09 327 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CNTRLQ7Z7A1 2325 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TMTC2Q8N394 836 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 WNT2BQ93097 391 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CCDC34Q96HJ3 373 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 SEPT9Q9UHD8 586 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PRR12Q9ULL5 1215 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CYP46A1Q9Y6A2 500 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TNKSO95271 1327 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 ZFHX2Q9C0A1 2572 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TBKBP1A7MCY6 615 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 FAM155AB1AL88 458 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 WNT7AO00755 349 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 SH2B2O14492 632 aaPredicted RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 ZC3H11AO75152 810 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 CA3P07451 260 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NR3C2P08235 984 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TRIM21P19474 475 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NOP2P46087 812 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 SSRP1Q08945 709 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PAK2Q13177 524 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 SPECC1Q5M775 1068 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 LIN9Q5TKA1 542 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 COPS5Q92905 334 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 GTF3C6Q969F1 213 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 PIGSQ96S52 555 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 ZMYND15Q9H091 742 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 GINM1Q9NU53 330 aa4.26□□□□□ -1.73
SMC1B-201ENST00000357450 TRMT13Q9NUP7 481 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NOL7Q9UMY1 257 aaKnown RBP4.26□□□□□ -1.73
SMC1B-201ENST00000357450 NOTCH2Q04721 2471 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 LRRIQ4A6NIV6 560 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 UNCXA6NJT0 531 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 CDKL5O76039 1030 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 GNA11P29992 359 aa4.25□□□□□ -1.73
SMC1B-201ENST00000357450 ADCY7P51828 1080 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms