RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
UPK3B-202ENST00000334348 BCL9O00512 1426 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 F8VZ95 297 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 DAPK3O43293 454 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 CYTH3O43739 400 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 ZBTB48P10074 688 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 CYP2D6P10635 497 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 EIF3BP55884 814 aaKnown RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 RAPGEF1Q13905 1077 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 SPDYCQ5MJ68 293 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 HIBCHQ6NVY1 386 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 NEK8Q86SG6 692 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 LRRC57Q8N9N7 239 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 AP1M1Q9BXS5 423 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 TRIM6Q9C030 488 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 SBF2Q86WG5 1849 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 ORC2Q13416 577 aaPredicted RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 RIPK1Q13546 671 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 ASIC2Q16515 512 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 ZCWPW2Q504Y3 356 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 RSRC1Q96IZ7 334 aaKnown RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 PNMA5Q96PV4 448 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 DDX47Q9H0S4 455 aaKnown RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 EBF2Q9HAK2 575 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 IL17RBQ9NRM6 502 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 SLC12A4Q9UP95 1085 aa17.77■□□□□ 0.44
UPK3B-202ENST00000334348 NOC2LQ9Y3T9 749 aaKnown RBP17.77■□□□□ 0.44
UPK3B-202ENST00000334348 MYH1P12882 1939 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 NEBLO76041 1014 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 PPP1R7Q15435 360 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 ANKS4BQ8N8V4 417 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 CCDC26Q8TAB7 109 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 ZNF317Q96PQ6 595 aaPredicted RBP17.76■□□□□ 0.43
UPK3B-202ENST00000334348 SLC4A9Q96Q91 983 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 BAIAP2L1Q9UHR4 511 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 CASZ1Q86V15 1759 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 NUP98P52948 1817 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 KRIT1O00522 736 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 ASAP2O43150 1006 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
UPK3B-202ENST00000334348 TFAP4Q01664 338 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 ARID5AQ03989 594 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 DHX9Q08211 1270 aaKnown RBP17.76■□□□□ 0.43
UPK3B-202ENST00000334348 ITIH4Q14624 930 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 RASGEF1CQ8N431 466 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 METTL13Q8N6R0 699 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 FAM133AQ8N9E0 248 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 LRRC27Q9C0I9 530 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 FAM114A2Q9NRY5 505 aa17.76■□□□□ 0.43
UPK3B-202ENST00000334348 CTNND1O60716 968 aaKnown RBP17.75■□□□□ 0.43
UPK3B-202ENST00000334348 RPSAP08865 295 aaKnown RBP17.75■□□□□ 0.43
UPK3B-202ENST00000334348 NT5C2P49902 561 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 PPP2R5AQ15172 486 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 LRRC41Q15345 812 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 ACCSLQ4AC99 568 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 LRCH2Q5VUJ6 765 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 MYOCDQ8IZQ8 938 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 CCDC63Q8NA47 563 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 PROCA1Q8NCQ7 364 aaPredicted RBP17.75■□□□□ 0.43
UPK3B-202ENST00000334348 MDM1Q8TC05 714 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 NSUN4Q96CB9 384 aaKnown RBP17.75■□□□□ 0.43
UPK3B-202ENST00000334348 CEP63Q96MT8 703 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 AMACRQ9UHK6 382 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 TRAF5O00463 557 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 PPP1R12BO60237 982 aaPredicted RBP17.75■□□□□ 0.43
UPK3B-202ENST00000334348 PPFIA2O75334 1257 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 GNA14O95837 355 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 NAA25Q14CX7 972 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 PIGWQ7Z7B1 504 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 GLIS3Q8NEA6 775 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 RAD54LQ92698 747 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 DDX12PQ92771 950 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 CDK5RAP3Q96JB5 506 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 GANQ9H2C0 597 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 BATF3Q9NR55 127 aa17.75■□□□□ 0.43
UPK3B-202ENST00000334348 TXKP42681 527 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 MARSP56192 900 aaKnown RBP17.74■□□□□ 0.43
UPK3B-202ENST00000334348 TRIM59Q8IWR1 403 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 CCHCR1Q8TD31 782 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 TBC1D31Q96DN5 1066 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 TXLNGYQ9BZA5 131 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.74■□□□□ 0.43
UPK3B-202ENST00000334348 A0A1B0GUL6 1792 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 CFAP73A6NFT4 308 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 BUB1BO60566 1050 aaPredicted RBP17.74■□□□□ 0.43
UPK3B-202ENST00000334348 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
UPK3B-202ENST00000334348 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.43
UPK3B-202ENST00000334348 NAPAP54920 295 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 CAVIN4Q5BKX8 364 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 HOOK3Q86VS8 718 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 MTMR9Q96QG7 549 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 LZTS2Q9BRK4 669 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 LRRC4CQ9HCJ2 640 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 C6orf50Q9HD87 102 aa17.74■□□□□ 0.43
UPK3B-202ENST00000334348 UTP11Q9Y3A2 253 aaKnown RBP17.74■□□□□ 0.43
UPK3B-202ENST00000334348 PALM3A6NDB9 673 aaPredicted RBP17.73■□□□□ 0.43
UPK3B-202ENST00000334348 TTI1O43156 1089 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 ITGA4P13612 1032 aa17.73■□□□□ 0.43
UPK3B-202ENST00000334348 GNA11P29992 359 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms