RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 C6orf163Q5TEZ5 329 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 OR2W6PQ8NHA6 318 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 EXOC7Q9UPT5 735 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 BCS1LQ9Y276 419 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MYO18AQ92614 2054 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 POC1B-GALNT4F8VUJ3 575 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 RNF225M0QZC1 329 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 FOSP01100 380 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 GCLMP48507 274 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 PSMD2Q13200 908 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TTLL12Q14166 644 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 ARHGEF2Q92974 986 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 NOC2LQ9Y3T9 749 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 STK24Q9Y6E0 443 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 C1orf167Q5SNV9 1468 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 ITIH6Q6UXX5 1313 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 AGLP35573 1532 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TCP10L2B9ZVM9 353 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 KCNQ2O43526 872 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 DLATP10515 647 aaKnown RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 GUCY2CP25092 1073 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 QRICH1Q2TAL8 776 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 C12orf60Q5U649 245 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 CCT8L2Q96SF2 557 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 GOLPH3Q9H4A6 298 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 DNAJC12Q9UKB3 198 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 AGTPBP1Q9UPW5 1226 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MYO10Q9HD67 2058 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 WDR91A4D1P6 747 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 CCDC38Q502W7 563 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 PPP1R12CQ9BZL4 782 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TRIM49P0CI25 452 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TRIM49CP0CI26 452 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 BFSP1Q12934 665 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 ITPK1Q13572 414 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 FYB2Q5VWT5 728 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 TBC1D1Q86TI0 1168 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 IMPG2Q9BZV3 1241 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.01□□□□□ -1.614e-6■□□□□ 10.2
VPS13C-201ENST00000249837 UBE2TQ9NPD8 197 aaPredicted RBP5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MYH1P12882 1939 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 DR1Q01658 176 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 GDAP1Q8TB36 358 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 SERPINB13Q9UIV8 391 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 L1RE1Q9UN81 338 aa5.01□□□□□ -1.61
VPS13C-201ENST00000249837 ATF2P15336 505 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 DESP17661 470 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 RCAN1P53805 252 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 CDC37Q16543 378 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 RNF10Q8N5U6 811 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 HNRNPLLQ8WVV9 542 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 HVCN1Q96D96 273 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 BARHL2Q9NY43 387 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 SLIT1O75093 1534 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 LRRIQ3A6PVS8 624 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 BBOX1O75936 387 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GH2P01242 217 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 VEGFAP15692 232 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 ATF7P17544 494 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 KCNB1Q14721 858 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 DNAAF5Q86Y56 855 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 PPM1KQ8N3J5 372 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GUF1Q8N442 669 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 MAK16Q9BXY0 300 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 EDEM3Q9BZQ6 932 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 ECM2O94769 699 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 FTLP02792 175 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 GCFC2P16383 781 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 TMED2Q15363 201 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GLE1Q53GS7 698 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 HP1BP3Q5SSJ5 553 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 DYDC2Q96IM9 177 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 FMO2Q99518 471 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 CEP72Q9P209 647 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 PARP2Q9UGN5 583 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 TBK1Q9UHD2 729 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 TNS3Q68CZ2 1445 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 C3P01024 1663 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 CLRN2A0PK11 232 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 BAG2O95816 211 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GAP43P17677 238 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GPSM2P81274 684 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 SYDE2Q5VT97 1194 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 PROM2Q8N271 834 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 DMGDHQ9UI17 866 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 ODF2LQ9ULJ1 636 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 RGPD2P0DJD1 1756 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 LSP1P33241 339 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 PSMC2P35998 433 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 GPATCH4Q5T3I0 446 aaKnown RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 CROCCP2Q86T23 111 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 ELOA2Q8IYF1 753 aaPredicted RBP5□□□□□ -1.61
VPS13C-201ENST00000249837 ANAPC5Q9UJX4 755 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 LOC102724159A0A0B4J2E5 919 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 PVALEFA0A1B0GWK0 134 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GOLGA8SH3BPF8 625 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 ATP5DP30049 168 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 GBP1P32455 592 aa5□□□□□ -1.61
VPS13C-201ENST00000249837 PWP2Q15269 919 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms