RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
XRCC1-209ENST00000599693 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
XRCC1-209ENST00000599693 PIGSQ96S52 555 aa17.3■□□□□ 0.36
XRCC1-209ENST00000599693 POP1Q99575 1024 aaKnown RBP17.3■□□□□ 0.36
XRCC1-209ENST00000599693 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
XRCC1-209ENST00000599693 RIOX1Q9H6W3 641 aa17.3■□□□□ 0.36
XRCC1-209ENST00000599693 BAZ2BQ9UIF8 2168 aaKnown RBP17.29■□□□□ 0.36
XRCC1-209ENST00000599693 SPATA31C2B4DYI2 1134 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 GRM6O15303 877 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 FIBPO43427 364 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 BMPR1AP36894 532 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 HYAL1Q12794 435 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 GRM4Q14833 912 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 SMAD2Q15796 467 aaKnown RBP17.29■□□□□ 0.36
XRCC1-209ENST00000599693 HFE2Q6ZVN8 426 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 CYB5R4Q7L1T6 521 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 PLEKHM2Q8IWE5 1019 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 RC3H2Q9HBD1 1191 aaKnown RBP17.29■□□□□ 0.36
XRCC1-209ENST00000599693 KAT6AQ92794 2004 aa17.29■□□□□ 0.36
XRCC1-209ENST00000599693 NRCAMQ92823 1304 aa17.28■□□□□ 0.36
XRCC1-209ENST00000599693 MBTPS2O43462 519 aa17.28■□□□□ 0.36
XRCC1-209ENST00000599693 CHRNA1P02708 482 aa17.28■□□□□ 0.36
XRCC1-209ENST00000599693 GHRP10912 638 aa17.28■□□□□ 0.36
XRCC1-209ENST00000599693 DLX2Q07687 328 aaPredicted RBP17.28■□□□□ 0.36
XRCC1-209ENST00000599693 CLUL1Q15846 466 aa17.28■□□□□ 0.36
XRCC1-209ENST00000599693 UTP14CQ5TAP6 766 aaKnown RBP17.28■□□□□ 0.36
XRCC1-209ENST00000599693 CLP1Q92989 425 aaKnown RBP17.28■□□□□ 0.36
XRCC1-209ENST00000599693 PNMA6FA0A0J9YX94 578 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 CYTH3O43739 400 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 MGAT3Q09327 533 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 SMAD4Q13485 552 aaKnown RBP17.27■□□□□ 0.36
XRCC1-209ENST00000599693 HERC4Q5GLZ8 1057 aaPredicted RBP17.27■□□□□ 0.36
XRCC1-209ENST00000599693 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 EHMT1Q9H9B1 1298 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 MUTYHQ9UIF7 546 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 TELO2Q9Y4R8 837 aa17.27■□□□□ 0.36
XRCC1-209ENST00000599693 TTC3P53804 2025 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 TBX10O75333 385 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 MMP1P03956 469 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 LPIN1Q14693 890 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 TAF2Q6P1X5 1199 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 ZNF689Q96CS4 500 aaPredicted RBP17.26■□□□□ 0.35
XRCC1-209ENST00000599693 MFSD14AQ96MC6 490 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 SENP7Q9BQF6 1050 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 RTEL1Q9NZ71 1219 aa17.26■□□□□ 0.35
XRCC1-209ENST00000599693 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
XRCC1-209ENST00000599693 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.35
XRCC1-209ENST00000599693 SP4Q02446 784 aa17.25■□□□□ 0.35
XRCC1-209ENST00000599693 BTG3Q14201 252 aaPredicted RBP17.25■□□□□ 0.35
XRCC1-209ENST00000599693 RNF135Q8IUD6 432 aa17.25■□□□□ 0.35
XRCC1-209ENST00000599693 PLVAPQ9BX97 442 aa17.25■□□□□ 0.35
XRCC1-209ENST00000599693 CD207Q9UJ71 328 aa17.25■□□□□ 0.35
XRCC1-209ENST00000599693 KIAA1671Q9BY89 1806 aa17.25■□□□□ 0.35
XRCC1-209ENST00000599693 TECTAO75443 2155 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 STXBP3O00186 592 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 ENPP3O14638 875 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 LINC01565O15544 149 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 CSPG5O95196 566 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 NUCB1Q02818 461 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 TRDNQ13061 729 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 PPFIA1Q13136 1202 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 PCNX4Q63HM2 1172 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 XRRA1Q6P2D8 792 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 TSHZ1Q6ZSZ6 1077 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 RSPH3Q86UC2 560 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
XRCC1-209ENST00000599693 IL25Q9H293 177 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
XRCC1-209ENST00000599693 ERICH2A1L162 156 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
XRCC1-209ENST00000599693 DGKIO75912 1065 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 TCF7P36402 384 aaPredicted RBP17.23■□□□□ 0.35
XRCC1-209ENST00000599693 TROAPQ12815 778 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 FBXO47Q5MNV8 452 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 NLRX1Q86UT6 975 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 P2RX5Q93086 422 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 MSLNLQ96KJ4 702 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
XRCC1-209ENST00000599693 SENP2Q9HC62 589 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
XRCC1-209ENST00000599693 TUBE1Q9UJT0 475 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 CDY2AQ9Y6F7 541 aa17.23■□□□□ 0.35
XRCC1-209ENST00000599693 MBLAC1A4D2B0 266 aaPredicted RBP17.22■□□□□ 0.35
XRCC1-209ENST00000599693 NDUFV1P49821 464 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 ADAM15Q13444 863 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 AAMPQ13685 434 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 CAMK1Q14012 370 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 WTAPQ15007 396 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 GRIK4Q16099 956 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 USP17L6PQ6QN14 398 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 EDAQ92838 391 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 CUL5Q93034 780 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 PPP2R3CQ969Q6 453 aa17.22■□□□□ 0.35
XRCC1-209ENST00000599693 ERAP1Q9NZ08 941 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms