RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ZNF589Q86UQ0 364 aaPredicted RBP11.86□□□□□ -0.51
GGA3-219ENST00000584550 ADGRF4Q8IZF3 695 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 APBB2Q92870 758 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 ASIC4Q96FT7 647 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 USP15Q9Y4E8 981 aaPredicted RBP11.86□□□□□ -0.51
GGA3-219ENST00000584550 PCDHGC5Q9Y5F6 944 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 COL4A6Q14031 1691 aa11.86□□□□□ -0.51
GGA3-219ENST00000584550 HIP1O00291 1037 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 ENPP3O14638 875 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 PPFIA3O75145 1194 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 FGAP02671 866 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 CHRNA1P02708 482 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 LGALS2P05162 132 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 GHRP10912 638 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 SP100P23497 879 aaPredicted RBP11.85□□□□□ -0.51
GGA3-219ENST00000584550 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
GGA3-219ENST00000584550 COASYQ13057 564 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 SMRP1Q8NCR6 262 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 CLP1Q92989 425 aaKnown RBP11.85□□□□□ -0.51
GGA3-219ENST00000584550 TTC14Q96N46 770 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 IRF2BPLQ9H1B7 796 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 MRPL11Q9Y3B7 192 aaKnown RBP11.85□□□□□ -0.51
GGA3-219ENST00000584550 MYH6P13533 1939 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 CCDC171Q6TFL3 1326 aa11.85□□□□□ -0.51
GGA3-219ENST00000584550 PER2O15055 1255 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 GLP2RO95838 553 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 ITGB1P05556 798 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 UBA1P22314 1058 aaKnown RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 HOXC8P31273 242 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 ARHGAP4P98171 946 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 CBX2Q14781 532 aaPredicted RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 PAN2Q504Q3 1202 aaKnown RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 GPATCH4Q5T3I0 446 aaKnown RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 ZBTB33Q86T24 672 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 EFHBQ8N7U6 833 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 KLHL23Q8NBE8 558 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 IL31RAQ8NI17 732 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 SPPL3Q8TCT6 385 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 PPP2R3CQ969Q6 453 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 PHF7Q9BWX1 381 aaPredicted RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
GGA3-219ENST00000584550 MRPL42Q9Y6G3 142 aaKnown RBP11.84□□□□□ -0.51
GGA3-219ENST00000584550 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 CAND2O75155 1236 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 DGKIO75912 1065 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 IBSPP21815 317 aaPredicted RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 MFAP1P55081 439 aaKnown RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 UTP14CQ5TAP6 766 aaKnown RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 KCNV1Q6PIU1 500 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 MFSD6Q6ZSS7 791 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 TRIM50Q86XT4 487 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 MICAL1Q8TDZ2 1067 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 POF1BQ8WVV4 589 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 ZNF689Q96CS4 500 aaPredicted RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 PDCD2LQ9BRP1 358 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 APOL5Q9BWW9 433 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 PLVAPQ9BX97 442 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 TLE6Q9H808 572 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 TELO2Q9Y4R8 837 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 PTPRZ1P23471 2315 aaPredicted RBP11.83□□□□□ -0.52
GGA3-219ENST00000584550 KIAA1671Q9BY89 1806 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 CACNA1AO00555 2505 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 DOCK5Q9H7D0 1870 aa11.83□□□□□ -0.52
GGA3-219ENST00000584550 PRR23AA6NEV1 266 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 OPLAHO14841 1288 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 GNAT1P11488 350 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 ICAM3P32942 547 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 LPIN1Q14693 890 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 PGM5Q15124 567 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 ALX1Q15699 326 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 FAM26DQ5JW98 314 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 RUFY4Q6ZNE9 571 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 LMBR1Q8WVP7 490 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 RIPOR3Q96MK2 946 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 JMJD4Q9H9V9 463 aa11.82□□□□□ -0.52
GGA3-219ENST00000584550 WDR87Q6ZQQ6 2873 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 PLXNA4Q9HCM2 1894 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 PROB1E7EW31 1015 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
GGA3-219ENST00000584550 CHMLP26374 656 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 ID4P47928 161 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 HSD17B4P51659 736 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 SP4Q02446 784 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 CYFIP1Q7L576 1253 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 FCHSD1Q86WN1 690 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 VN1R2Q8NFZ6 395 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 RUFY2Q8WXA3 655 aa11.81□□□□□ -0.52
GGA3-219ENST00000584550 P2RX5Q93086 422 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms