RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 LETM2Q2VYF4 491 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 FAM109BQ6ICB4 259 aaPredicted RBP18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 LRCH3Q96II8 777 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 KCNH7Q9NS40 1196 aa18.1■□□□□ 0.49
CSNK1D-223ENST00000584472 DOCK5Q9H7D0 1870 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 GRIN2DO15399 1336 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 CYP3A7-CYP3A51PA0A087WV96 503 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 TRIM43BA6NCK2 446 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 CYP3A7P24462 503 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 ZNF76P36508 570 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 HSDL1Q3SXM5 330 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 PPP4R3AQ6IN85 833 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 MOXD1Q6UVY6 613 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 CYFIP1Q7L576 1253 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 CYP2W1Q8TAV3 490 aa18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 TRIM43Q96BQ3 446 aaPredicted RBP18.09■□□□□ 0.49
CSNK1D-223ENST00000584472 COL6A3P12111 3177 aa18.08■□□□□ 0.49
CSNK1D-223ENST00000584472 IGLV3-22A0A075B6J6 115 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 FAM86B1E9PN63 330 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 NOP56O00567 594 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 PQBP1O60828 265 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 ATP9AO75110 1047 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 TDP2O95551 362 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 F2P00734 622 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 ATP2B1P20020 1258 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 SETQ01105 290 aaPredicted RBP18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 FAAP100Q0VG06 881 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 NBR1Q14596 966 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 TTC38Q5R3I4 469 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 MBOAT7Q96N66 472 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 NAP1L4Q99733 375 aaKnown RBP18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 PRDM5Q9NQX1 630 aaPredicted RBP18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 TBX21Q9UL17 535 aa18.08■□□□□ 0.48
CSNK1D-223ENST00000584472 NFASCO94856 1347 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 GCFC2P16383 781 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 PSMC6P62333 389 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 SH3RF1Q7Z6J0 888 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 BADQ92934 168 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 KATNAL1Q9BW62 490 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 BCAS3Q9H6U6 928 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 AGO4Q9HCK5 861 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
CSNK1D-223ENST00000584472 TLR3O15455 904 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 SORBS3O60504 671 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 ARP10275 920 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 RAG1P15918 1043 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 PTPN11Q06124 597 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 ZNF174Q15697 407 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 NBPF20Q3BBV1 942 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 Q4G0T1 1027 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 PLA2G4DQ86XP0 818 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 KAT2BQ92831 832 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 LENG9Q96B70 501 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 GPR20Q99678 358 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 JPH1Q9HDC5 661 aaPredicted RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 TMEM39AQ9NV64 488 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 DDX25Q9UHL0 483 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
CSNK1D-223ENST00000584472 SLC37A4O43826 429 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 TIMP1P01033 207 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 CD4P01730 458 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 ZNF286BP0CG31 522 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 MCM7P33993 719 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 PRR16Q569H4 304 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 ZNF396Q96N95 335 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 USP28Q96RU2 1077 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 SDF4Q9BRK5 362 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 C16orf70Q9BSU1 422 aa18.05■□□□□ 0.48
CSNK1D-223ENST00000584472 HAS3O00219 553 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 IPO5O00410 1097 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 LGALS2P05162 132 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 SMAD3P84022 425 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 DNM1Q05193 864 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 FPGSQ05932 587 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 ITGB3BPQ13352 177 aaPredicted RBP18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 ATL3Q6DD88 541 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 SESTD1Q86VW0 696 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 POTEDQ86YR6 584 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 DEFB123Q8N688 67 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 FTOQ9C0B1 505 aaKnown RBP eCLIP18.04■□□□□ 0.483e-10■■■■■ 39.9
CSNK1D-223ENST00000584472 PKD2L1Q9P0L9 805 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 SLC9A2Q9UBY0 812 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
CSNK1D-223ENST00000584472 NEMFO60524 1076 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 ITGB8P26012 769 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 PSEN2P49810 448 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 SP4Q02446 784 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 MFSD10Q14728 455 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 SF3A1Q15459 793 aaKnown RBP18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 SHHQ15465 462 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 MFSD5Q6N075 450 aa18.03■□□□□ 0.48
CSNK1D-223ENST00000584472 SEPT1Q8WYJ6 367 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms