RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 C4AP0C0L4 1744 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 C4BP0C0L5 1744 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 ITGB4P16144 1822 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 CTAGE9A4FU28 777 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 PSMA7O14818 248 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 CCNT1O60563 726 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 TNFRSF21O75509 655 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 RPS6KA4O75676 772 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 UFL1O94874 794 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 IPO7O95373 1038 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 GYPCP04921 128 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 RHOXF2BP0C7M4 288 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 INPP5BP32019 993 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 LONP1P36776 959 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 EIF6P56537 245 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 NFIXQ14938 502 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 GRIK5Q16478 980 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 ZNF658Q5TYW1 1059 aaPredicted RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 C12orf60Q5U649 245 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 ALG1LQ6GMV1 187 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 SLC35F6Q8N357 371 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 TNFRSF25Q93038 417 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 RHOXF2Q9BQY4 288 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 BRINP2Q9C0B6 783 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 UBA5Q9GZZ9 404 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 SEC63Q9UGP8 760 aaKnown RBP5.98□□□□□ -1.45
VAPA-203ENST00000577539 SHANK3Q9BYB0 1731 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 MYH3P11055 1940 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 MYH2Q9UKX2 1941 aa5.98□□□□□ -1.45
VAPA-203ENST00000577539 PARP1P09874 1014 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 MTIF2P46199 727 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 CHMP4BP1P59074 171 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 GSTO1P78417 241 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 PICALMQ13492 652 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 CDKAL1Q5VV42 579 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 PEAR1Q5VY43 1037 aaPredicted RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 CYP2U1Q7Z449 544 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 ZNF804AQ7Z570 1209 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 DGKHQ86XP1 1220 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 TMTC1Q8IUR5 882 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 CNBD1Q8NA66 436 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 UIMC1Q96RL1 719 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 EYA3Q99504 573 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 TMEM47Q9BQJ4 181 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 IL17RBQ9NRM6 502 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 RWDD2AQ9UIY3 292 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 LUC7L2Q9Y383 392 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 SMCO2A6NFE2 343 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 TFRCP02786 760 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 ADH1AP07327 375 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 IDEP14735 1019 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 ATF4P18848 351 aaPredicted RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 TRIM21P19474 475 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 GARTP22102 1010 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 BTDP43251 543 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 SETQ01105 290 aaPredicted RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 TERF2Q15554 542 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 SBK1Q52WX2 424 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 TCP11X2Q5H9J9 407 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 SLC10A5Q5PT55 438 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 KIAA1328Q86T90 577 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 CSGALNACT2Q8N6G5 542 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 CDK5RAP3Q96JB5 506 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 NAA15Q9BXJ9 866 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 PARD6BQ9BYG5 372 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 DISC1Q9NRI5 854 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 EXOC1Q9NV70 894 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 MRFAP1Q9Y605 127 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 SSBP05455 408 aaKnown RBP eCLIP5.97□□□□□ -1.45
VAPA-203ENST00000577539 TECP42680 631 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 TXKP42681 527 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 TRAPPC3LQ5T215 181 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 ARL6IP4Q66PJ3 421 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 CYP26C1Q6V0L0 522 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 CABP7Q86V35 215 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 GPR161Q8N6U8 529 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 ITPKCQ96DU7 683 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 CHP1Q99653 195 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 ZNF287Q9HBT7 754 aa5.97□□□□□ -1.45
VAPA-203ENST00000577539 ZNHIT6Q9NWK9 470 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 TTF2Q9UNY4 1162 aaKnown RBP5.97□□□□□ -1.45
VAPA-203ENST00000577539 RNF225M0QZC1 329 aaPredicted RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 ZBTB24O43167 697 aaPredicted RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 KIF20AO95235 890 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 TBC1D8BQ0IIM8 1120 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 GRM4Q14833 912 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 CT47A1Q5JQC4 288 aaPredicted RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 C1orf53Q5VUE5 145 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 APTXQ7Z2E3 356 aaKnown RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 TREML1Q86YW5 311 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 RRP36Q96EU6 259 aaKnown RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 PHACTR1Q9C0D0 580 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 C12orf49Q9H741 205 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 C6orf50Q9HD87 102 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 ZCCHC17Q9NP64 241 aaKnown RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 ABHD10Q9NUJ1 306 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 PCDHA6Q9UN73 950 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 USP20Q9Y2K6 914 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 PCDHA8Q9Y5H6 950 aa5.96□□□□□ -1.45
VAPA-203ENST00000577539 FHOD1Q9Y613 1164 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms