RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SLF1Q9BQI6 1058 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 MTG1Q9BT17 334 aaPredicted RBP6.4□□□□□ -1.38
HERC1-213ENST00000561359 COPRSQ9NQ92 184 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 PDGFCQ9NRA1 345 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 FBXO40Q9UH90 709 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 Q9Y3F1 56 aa6.4□□□□□ -1.38
HERC1-213ENST00000561359 CDK5RAP2Q96SN8 1893 aa6.4□□□□□ -1.39
HERC1-213ENST00000561359 GPR179Q6PRD1 2367 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 KMT2EQ8IZD2 1858 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 USP24Q9UPU5 2620 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 ZBED4O75132 1171 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 IDH1O75874 414 aaKnown RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 CYP2E1P05181 493 aaPredicted RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 SELPP16109 830 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 GTF2F1P35269 517 aaKnown RBP eCLIP6.39□□□□□ -1.39
HERC1-213ENST00000561359 CPT1AP50416 773 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 PURAQ00577 322 aaKnown RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 GABPAQ06546 454 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 CBX2Q14781 532 aaPredicted RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 ACAP1Q15027 740 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 BRDTQ58F21 947 aaPredicted RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 TTC39AQ5SRH9 613 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 TMEM63BQ5T3F8 832 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 NFRKBQ6P4R8 1299 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 KIAA1211Q6ZU35 1233 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 FBXO11Q86XK2 927 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 FBXO16Q8IX29 292 aaPredicted RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 PHTF2Q8N3S3 785 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 CAGE1Q8TC20 777 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 AFAP1L1Q8TED9 768 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 POM121Q96HA1 1249 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 YME1L1Q96TA2 773 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 HINFPQ9BQA5 517 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 ESYT1Q9BSJ8 1104 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 RAVER2Q9HCJ3 691 aaKnown RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 INCENPQ9NQS7 918 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
HERC1-213ENST00000561359 DDX49Q9Y6V7 483 aaKnown RBP6.39□□□□□ -1.39
HERC1-213ENST00000561359 USP17L12C9JPN9 530 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 USP17L21D6R901 530 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 LINC01565O15544 149 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 NBNO60934 754 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 PARNO95453 639 aaKnown RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 EYA4O95677 639 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 AMHP03971 560 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 EEF2P13639 858 aaKnown RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 AKR1B1P15121 316 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 ICAM3P32942 547 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 CTNNB1P35222 781 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 RRP1P56182 461 aaKnown RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 CENPCQ03188 943 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 GPNMBQ14956 572 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 PTGISQ16647 500 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 PTPN21Q16825 1174 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 TCTN1Q2MV58 587 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 TMEM214Q6NUQ4 689 aaKnown RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.38□□□□□ -1.39
HERC1-213ENST00000561359 TAS1R3Q7RTX0 852 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 TMEM105Q8N8V8 129 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 PRPF38AQ8NAV1 312 aaKnown RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 PLPP7Q8NBV4 271 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 CHST13Q8NET6 341 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 CHAMP1Q96JM3 812 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 ZSCAN10Q96SZ4 725 aaPredicted RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 NUP88Q99567 741 aaPredicted RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 PHF7Q9BWX1 381 aaPredicted RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 GRIP2Q9C0E4 1043 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 TIMMDC1Q9NPL8 285 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 PIH1D3Q9NQM4 214 aaKnown RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 MCM9Q9NXL9 1143 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 DLL3Q9NYJ7 618 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.38□□□□□ -1.39
HERC1-213ENST00000561359 MCM3APO60318 1980 aa6.38□□□□□ -1.39
HERC1-213ENST00000561359 SIP14410 1827 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 PTPRCP08575 1304 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 RAD50Q92878 1312 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 IL2RAP01589 272 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 LMNAP02545 664 aaKnown RBP6.37□□□□□ -1.39
HERC1-213ENST00000561359 CXCL10P02778 98 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 ZAP70P43403 619 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
HERC1-213ENST00000561359 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
HERC1-213ENST00000561359 ADAM15Q13444 863 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 RSPO4Q2I0M5 234 aaPredicted RBP6.37□□□□□ -1.39
HERC1-213ENST00000561359 DUSP28Q4G0W2 176 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 CCDC158Q5M9N0 1113 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 TAPT1Q6NXT6 567 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 FOXR1Q6PIV2 292 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 WDR63Q8IWG1 891 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 FAM133AQ8N9E0 248 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 SMRP1Q8NCR6 262 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 OR6J1Q8NGC5 347 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 PPP2R3CQ969Q6 453 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 DYNLL2Q96FJ2 89 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 MSLNLQ96KJ4 702 aa6.37□□□□□ -1.39
HERC1-213ENST00000561359 C11orf84Q9BUA3 381 aaPredicted RBP6.37□□□□□ -1.39
HERC1-213ENST00000561359 MFSD1Q9H3U5 465 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms