RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 SP4Q02446 784 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 SSRP1Q08945 709 aaKnown RBP25.85■■□□□ 1.73
PABPN1-207ENST00000556821 TMEM240Q5SV17 173 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 TRIM50Q86XT4 487 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 TRIM22Q8IYM9 498 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 C7orf31Q8N865 590 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 GIMAP8Q8ND71 665 aaPredicted RBP25.85■■□□□ 1.73
PABPN1-207ENST00000556821 CCDC148Q8NFR7 591 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 RASGRP4Q8TDF6 673 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 SCLYQ96I15 445 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 IL23AQ9NPF7 189 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 KCNH7Q9NS40 1196 aa25.85■■□□□ 1.73
PABPN1-207ENST00000556821 GRXCR1A8MXD5 290 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 H3BRB1 525 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 MAFGO15525 162 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 BMP1P13497 986 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 CEP55Q53EZ4 464 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 MICAL3Q7RTP6 2002 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 DHX38Q92620 1227 aaKnown RBP25.84■■□□□ 1.73
PABPN1-207ENST00000556821 AIFM3Q96NN9 605 aa25.84■■□□□ 1.73
PABPN1-207ENST00000556821 TUT1Q9H6E5 874 aaKnown RBP25.84■■□□□ 1.73
PABPN1-207ENST00000556821 EVPLQ92817 2033 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 PITPNM1O00562 1244 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 PFKFB2O60825 505 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 DEXIO95424 95 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 ARP10275 920 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 GNA11P29992 359 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 ZNF365Q70YC5 407 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 C1QTNF1Q9BXJ1 281 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 SLKQ9H2G2 1235 aaPredicted RBP25.83■■□□□ 1.73
PABPN1-207ENST00000556821 SH3GLB2Q9NR46 395 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 NOD1Q9Y239 953 aa25.83■■□□□ 1.73
PABPN1-207ENST00000556821 GSTTP1A0A1W2PQM5 241 aa25.82■■□□□ 1.72
PABPN1-207ENST00000556821 MEIS1O00470 390 aa25.82■■□□□ 1.72
PABPN1-207ENST00000556821 LARGE1O95461 756 aa25.82■■□□□ 1.72
PABPN1-207ENST00000556821 HOXC8P31273 242 aa25.82■■□□□ 1.72
PABPN1-207ENST00000556821 PSRC1Q6PGN9 363 aaPredicted RBP25.82■■□□□ 1.72
PABPN1-207ENST00000556821 NCOR1O75376 2440 aa25.82■■□□□ 1.72
PABPN1-207ENST00000556821 IGLV3-22A0A075B6J6 115 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 FAM86B1E9PN63 330 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 DTNBO60941 627 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 CYP3A4P08684 503 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 FAM86B2P0C5J1 330 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 TCF7P36402 384 aaPredicted RBP25.81■■□□□ 1.72
PABPN1-207ENST00000556821 ZNF200P98182 395 aaPredicted RBP25.81■■□□□ 1.72
PABPN1-207ENST00000556821 ANKRD1Q15327 319 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 MCTP2Q6DN12 878 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 CPLX2Q6PUV4 134 aaKnown RBP25.81■■□□□ 1.72
PABPN1-207ENST00000556821 WNT8BQ93098 351 aa25.81■■□□□ 1.72
PABPN1-207ENST00000556821 CTDNEP1O95476 244 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 RBL2Q08999 1139 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 ITGB3BPQ13352 177 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-207ENST00000556821 NPY5RQ15761 445 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 UTP14CQ5TAP6 766 aaKnown RBP25.8■■□□□ 1.72
PABPN1-207ENST00000556821 NIPA1Q7RTP0 329 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 AGO4Q9HCK5 861 aaKnown RBP25.8■■□□□ 1.72
PABPN1-207ENST00000556821 CXXC1Q9P0U4 656 aaPredicted RBP25.8■■□□□ 1.72
PABPN1-207ENST00000556821 MYO9BQ13459 2157 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 NFASCO94856 1347 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 STK36Q9NRP7 1315 aa25.8■■□□□ 1.72
PABPN1-207ENST00000556821 EDIL3O43854 480 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 IQCF3P0C7M6 154 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 SMIM10L2AP0DMW4 78 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 SMIM10L2BP0DMW5 78 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 NEK4P51957 841 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 BFSP2Q13515 415 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 CCDC85BQ15834 202 aaPredicted RBP25.79■■□□□ 1.72
PABPN1-207ENST00000556821 ME3Q16798 604 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 CAGE1Q8TC20 777 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 BICD2Q8TD16 824 aa25.79■■□□□ 1.72
PABPN1-207ENST00000556821 NECAB3Q96P71 396 aaPredicted RBP25.79■■□□□ 1.72
PABPN1-207ENST00000556821 JPH1Q9HDC5 661 aaPredicted RBP25.79■■□□□ 1.72
PABPN1-207ENST00000556821 NLRP5P59047 1200 aa25.78■■□□□ 1.72
PABPN1-207ENST00000556821 TRIM71Q2Q1W2 868 aaKnown RBP25.78■■□□□ 1.72
PABPN1-207ENST00000556821 SEPT1Q8WYJ6 367 aa25.78■■□□□ 1.72
PABPN1-207ENST00000556821 HERVK_113Q902F9 699 aa25.78■■□□□ 1.72
PABPN1-207ENST00000556821 RNPEPQ9H4A4 650 aa25.78■■□□□ 1.72
PABPN1-207ENST00000556821 CDKL5O76039 1030 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 ZNF76P36508 570 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 PTK7Q13308 1070 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 PLA2G4DQ86XP0 818 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 NECAB1Q8N987 351 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 AFAP1L1Q8TED9 768 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 PCYT2Q99447 389 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 SLC9A2Q9UBY0 812 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 ZNF215Q9UL58 517 aaPredicted RBP25.77■■□□□ 1.72
PABPN1-207ENST00000556821 PCDHA4Q9UN74 947 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 EMSYQ7Z589 1322 aa25.77■■□□□ 1.72
PABPN1-207ENST00000556821 M0R2N6 131 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 FGBP02675 491 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 GPNMBQ14956 572 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 TRAF7Q6Q0C0 670 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 DEFB128Q7Z7B8 93 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 SERINC5Q86VE9 423 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 CCDC155Q8N6L0 562 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 RETREG2Q8NC44 543 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 DAGLBQ8NCG7 672 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 GTF3C6Q969F1 213 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 KIF2CQ99661 725 aa25.76■■□□□ 1.71
PABPN1-207ENST00000556821 SDF4Q9BRK5 362 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms