RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 DHX37Q8IY37 1157 aaKnown RBP15.05■□□□□ -0
PRPF40B-209ENST00000548825 RBM12Q9NTZ6 932 aaKnown RBP15.05■□□□□ -0
PRPF40B-209ENST00000548825 TIAM2Q8IVF5 1701 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 A0A087X0T9 212 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 EDIL3O43854 480 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 MYL1P05976 194 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 FAM228BP0C875 321 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 CATSPER3Q86XQ3 398 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 PLAGL2Q9UPG8 496 aa15.05■□□□□ -0
PRPF40B-209ENST00000548825 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
PRPF40B-209ENST00000548825 TMEM110-MUSTN1A8MSY1 372 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 CEP104O60308 925 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 CCDC170Q8IYT3 715 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SPATA4Q8NEY3 305 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 LRRN2O75325 713 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 NMT1P30419 496 aaKnown RBP15.04■□□□□ -0
PRPF40B-209ENST00000548825 TRADDQ15628 312 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 ASIC2Q16515 512 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 GPATCH4Q5T3I0 446 aaKnown RBP15.04■□□□□ -0
PRPF40B-209ENST00000548825 TAF4BQ92750 862 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 REEP2Q9BRK0 252 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 ARMCX3Q9UH62 379 aaPredicted RBP15.04■□□□□ -0
PRPF40B-209ENST00000548825 NFU1Q9UMS0 254 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 COL16A1Q07092 1604 aaPredicted RBP15.04■□□□□ -0
PRPF40B-209ENST00000548825 IRS2Q9Y4H2 1338 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 KCNMA1Q12791 1236 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SYCP3Q8IZU3 236 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SH2D3CQ8N5H7 860 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SCFD1Q8WVM8 642 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 TTYH3Q9C0H2 523 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 PCIF1Q9H4Z3 704 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SH2D4AQ9H788 454 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 DNAJC18Q9H819 358 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 EPB41L5Q9HCM4 733 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 FAM53CQ9NYF3 392 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 LCMT1Q9UIC8 334 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 HDAC9Q9UKV0 1011 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SNX12Q9UMY4 172 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 SIK3Q9Y2K2 1263 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 JRKLQ9Y4A0 524 aa15.04■□□□□ -0
PRPF40B-209ENST00000548825 FAM86B1E9PN63 330 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 NDUFB10O96000 172 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 FAM86B2P0C5J1 330 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 LRRC55Q6ZSA7 311 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 RETREG2Q8NC44 543 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 MSANTD4Q8NCY6 345 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 CCDC43Q96MW1 224 aaKnown RBP15.03■□□□□ -0
PRPF40B-209ENST00000548825 ERGIC2Q96RQ1 377 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 PVALEFA0A1B0GWK0 134 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 GFPT2O94808 682 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 FAM13AO94988 1023 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 CYP11B2P19099 503 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
PRPF40B-209ENST00000548825 IQCEQ6IPM2 695 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
PRPF40B-209ENST00000548825 ACER1Q8TDN7 264 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 AFAP1L1Q8TED9 768 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 MAGEF1Q9HAY2 307 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 DOCK2Q92608 1830 aa15.03■□□□□ -0
PRPF40B-209ENST00000548825 HPDP32754 393 aaPredicted RBP15.02■□□□□ -0
PRPF40B-209ENST00000548825 LRRC63Q05C16 580 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 PDXDC1Q6P996 788 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
PRPF40B-209ENST00000548825 DNAJC19Q96DA6 116 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 P2RX7Q99572 595 aaKnown RBP15.02■□□□□ -0
PRPF40B-209ENST00000548825 AMNQ9BXJ7 453 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 FBXO28Q9NVF7 368 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 BCORQ6W2J9 1755 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 GOLGA6CA6NDK9 693 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 C21orf2O43822 256 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 GOLGA6DP0CG33 693 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 TRIM49P0CI25 452 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 TRIM49CP0CI26 452 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 XRCC5P13010 732 aaKnown RBP15.02■□□□□ -0
PRPF40B-209ENST00000548825 MEA1Q16626 185 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 TSGA10Q9BZW7 698 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 NT5C3AQ9H0P0 336 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 GOLGA6AQ9NYA3 693 aa15.02■□□□□ -0
PRPF40B-209ENST00000548825 MAP2K7O14733 419 aa15.02□□□□□ -0.01
PRPF40B-209ENST00000548825 HSPA1LP34931 641 aa15.02□□□□□ -0.01
PRPF40B-209ENST00000548825 CDAN1Q8IWY9 1227 aa15.02□□□□□ -0.01
PRPF40B-209ENST00000548825 PI4KBQ9UBF8 816 aa15.02□□□□□ -0.01
PRPF40B-209ENST00000548825 ECE2O60344 883 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 KRT14P02533 472 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 COG2Q14746 738 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 EXOC3L4Q17RC7 722 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 CRY2Q49AN0 593 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 KRT27Q7Z3Y8 459 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 SP8Q8IXZ3 490 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 ERMNQ8TAM6 284 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 RUSC1Q9BVN2 902 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 NHSL1Q5SYE7 1610 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 SMIM23A6NLE4 172 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 PPIP5K2O43314 1243 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 JAG1P78504 1218 aa15.01□□□□□ -0.01
PRPF40B-209ENST00000548825 DDX42Q86XP3 938 aaKnown RBP eCLIP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms