RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FBXL16Q8N461 479 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 SEPT8Q92599 483 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 BRF1Q92994 677 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 WNT8BQ93098 351 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 RAD9AQ99638 391 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 SDF4Q9BRK5 362 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 ANO3Q9BYT9 981 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 AZI2Q9H6S1 392 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 JPH1Q9HDC5 661 aaPredicted RBP10.7□□□□□ -0.7
YBX3-218ENST00000546298 FAM217BQ9NTX9 383 aaPredicted RBP10.7□□□□□ -0.7
YBX3-218ENST00000546298 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 PKD2L1Q9P0L9 805 aa10.7□□□□□ -0.7
YBX3-218ENST00000546298 GSTTP1A0A1W2PQM5 241 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 RRN3P2A6NIE6 340 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 STXBP3O00186 592 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 GJB5O95377 273 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 RPLP2P05387 115 aaKnown RBP10.69□□□□□ -0.7
YBX3-218ENST00000546298 SCG2P13521 617 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 CDC27P30260 824 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 ADD1P35611 737 aaKnown RBP10.69□□□□□ -0.7
YBX3-218ENST00000546298 TAP1Q03518 808 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 APOBRQ0VD83 1088 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 MBTPS1Q14703 1052 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
YBX3-218ENST00000546298 CEP55Q53EZ4 464 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 DBF4BQ8NFT6 615 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 LMBR1Q8WVP7 490 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 ATXN2LQ8WWM7 1075 aaKnown RBP10.69□□□□□ -0.7
YBX3-218ENST00000546298 COL25A1Q9BXS0 654 aaPredicted RBP10.69□□□□□ -0.7
YBX3-218ENST00000546298 C6orf50Q9HD87 102 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 KCNH7Q9NS40 1196 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 SLC9A2Q9UBY0 812 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 SNX14Q9Y5W7 946 aa10.69□□□□□ -0.7
YBX3-218ENST00000546298 NFASCO94856 1347 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 BAZ2BQ9UIF8 2168 aaKnown RBP10.68□□□□□ -0.7
YBX3-218ENST00000546298 ESYT2A0FGR8 921 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 MEIS1O00470 390 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 PRPF3O43395 683 aaKnown RBP10.68□□□□□ -0.7
YBX3-218ENST00000546298 POU3F3P20264 500 aaPredicted RBP10.68□□□□□ -0.7
YBX3-218ENST00000546298 RPS6KB1P23443 525 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 GNA11P29992 359 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 SREBF1P36956 1147 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 ADAM17P78536 824 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 DEFB103AP81534 67 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 CCDC85BQ15834 202 aaPredicted RBP10.68□□□□□ -0.7
YBX3-218ENST00000546298 GRIK4Q16099 956 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 PLEKHG4Q58EX7 1191 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 TJAP1Q5JTD0 557 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 FAM26DQ5JW98 314 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 RPAINQ86UA6 219 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 USP38Q8NB14 1042 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 ARNTL2Q8WYA1 636 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 APBB2Q92870 758 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 CERS4Q9HA82 394 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 THEGQ9P2T0 379 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 INSL6Q9Y581 213 aa10.68□□□□□ -0.7
YBX3-218ENST00000546298 CTSHP09668 335 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 CPA1P15085 419 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 SLC26A2P50443 739 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 MRPS5P82675 430 aaKnown RBP10.67□□□□□ -0.7
YBX3-218ENST00000546298 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 NIPA1Q7RTP0 329 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 PLPPR4Q7Z2D5 763 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 PLA2G4DQ86XP0 818 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 MYOCDQ8IZQ8 938 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 IL27Q8NEV9 243 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 CCDC148Q8NFR7 591 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 BICD2Q8TD16 824 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 PGBD1Q96JS3 809 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 TGS1Q96RS0 853 aaKnown RBP10.67□□□□□ -0.7
YBX3-218ENST00000546298 AGXT2Q9BYV1 514 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 ZMYND12Q9H0C1 365 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 TELO2Q9Y4R8 837 aa10.67□□□□□ -0.7
YBX3-218ENST00000546298 MBLAC1A4D2B0 266 aaPredicted RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 CYP3A4P08684 503 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 ARP10275 920 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 MARK3P27448 753 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 CLK2P49760 499 aaKnown RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 STAT5BP51692 787 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 EVCP57679 992 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 ACTR2P61160 394 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 ERVK-21P61565 698 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 AAK1Q2M2I8 961 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 TCTN1Q2MV58 587 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 FAM160B1Q5W0V3 765 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 FAM117BQ6P1L5 589 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 MICALL1Q8N3F8 863 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 CYP2W1Q8TAV3 490 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 RNF26Q9BY78 433 aaPredicted RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 IFIH1Q9BYX4 1025 aaKnown RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 AGO4Q9HCK5 861 aaKnown RBP10.66□□□□□ -0.7
YBX3-218ENST00000546298 TBC1D22BQ9NU19 505 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 TMEM260Q9NX78 707 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 LMCD1Q9NZU5 365 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 TCEAL9Q9UHQ7 104 aa10.66□□□□□ -0.7
YBX3-218ENST00000546298 TUBE1Q9UJT0 475 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms