RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MYCLP12524 364 aaPredicted RBP10.4□□□□□ -0.74
GNE-206ENST00000543356 CYP11B2P19099 503 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 GPBP1Q86WP2 473 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 SYT2Q8N9I0 419 aaPredicted RBP10.4□□□□□ -0.74
GNE-206ENST00000543356 DNERQ8NFT8 737 aa10.4□□□□□ -0.74
GNE-206ENST00000543356 FRMD3A2A2Y4 597 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 MAFGO15525 162 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 CHMP2AO43633 222 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 SLITRK3O94933 977 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 EYA4O95677 639 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 SLC25A27O95847 323 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 NR3C2P08235 984 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 STX17P56962 302 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 ITGB3BPQ13352 177 aaPredicted RBP10.39□□□□□ -0.75
GNE-206ENST00000543356 DYMQ7RTS9 669 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 NLRX1Q86UT6 975 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 SPC24Q8NBT2 197 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 GTF3C2Q8WUA4 911 aaPredicted RBP10.39□□□□□ -0.75
GNE-206ENST00000543356 DYDC2Q96IM9 177 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 INPP4AQ96PE3 977 aaPredicted RBP10.39□□□□□ -0.75
GNE-206ENST00000543356 PURBQ96QR8 312 aaKnown RBP10.39□□□□□ -0.75
GNE-206ENST00000543356 IWS1Q96ST2 819 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 ZNF408Q9H9D4 720 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 SLC45A1Q9Y2W3 748 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 SERPINC1P01008 464 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 CYP4A11Q02928 519 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 STK4Q13043 487 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 CCDC65Q8IXS2 484 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 KIAA0895Q8NCT3 520 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 GBA2Q9HCG7 927 aaPredicted RBP10.39□□□□□ -0.75
GNE-206ENST00000543356 SAMSN1Q9NSI8 373 aaKnown RBP10.39□□□□□ -0.75
GNE-206ENST00000543356 RGL1Q9NZL6 768 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 PNMA3Q9UL41 463 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 ZKSCAN5Q9Y2L8 839 aa10.39□□□□□ -0.75
GNE-206ENST00000543356 SSBP05455 408 aaKnown RBP eCLIP10.38□□□□□ -0.75
GNE-206ENST00000543356 FCER1AP12319 257 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 UBASH3AP57075 661 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 PSMC6P62333 389 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 COASYQ13057 564 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 ARSHQ5FYA8 562 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 ANKRD35Q8N283 1001 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 CDHR1Q96JP9 859 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 MOV10L1Q9BXT6 1211 aaKnown RBP10.38□□□□□ -0.75
GNE-206ENST00000543356 PANK4Q9NVE7 773 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 BCCIPQ9P287 314 aaKnown RBP eCLIP10.38□□□□□ -0.75
GNE-206ENST00000543356 IMPACTQ9P2X3 320 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 TRPM7Q96QT4 1865 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 BICDL2A1A5D9 508 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 CETPP11597 493 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 CCNE1P24864 410 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 KRT76Q01546 638 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 SPAG1Q07617 926 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 MAPK8IP2Q13387 824 aaPredicted RBP10.38□□□□□ -0.75
GNE-206ENST00000543356 CTTNQ14247 550 aaKnown RBP10.38□□□□□ -0.75
GNE-206ENST00000543356 TPD52L1Q16890 204 aaPredicted RBP10.38□□□□□ -0.75
GNE-206ENST00000543356 FOXR2Q6PJQ5 311 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 MIER3Q7Z3K6 550 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 GUF1Q8N442 669 aaKnown RBP10.38□□□□□ -0.75
GNE-206ENST00000543356 RDM1Q8NG50 284 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 NOC3LQ8WTT2 800 aaKnown RBP10.38□□□□□ -0.75
GNE-206ENST00000543356 P2RX5Q93086 422 aa10.38□□□□□ -0.75
GNE-206ENST00000543356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
GNE-206ENST00000543356 TESPA1A2RU30 521 aaPredicted RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 IDEP14735 1019 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 SFNP31947 248 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 JAK3P52333 1124 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 GTF2A2P52657 109 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 TERF1P54274 439 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 TTI2Q6NXR4 508 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 NCAPG2Q86XI2 1143 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 TPH2Q8IWU9 490 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 C2orf69Q8N8R5 385 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 NACC1Q96RE7 527 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 CTAGE1Q96RT6 745 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 SENP7Q9BQF6 1050 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 LXNQ9BS40 222 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 PAGR1Q9BTK6 254 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 KCND2Q9NZV8 630 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 RBPJLQ9UBG7 517 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 MAPK8IP1Q9UQF2 711 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 NFASCO94856 1347 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 DDX39AO00148 427 aaKnown RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 KIF20AO95235 890 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 LYPLA2O95372 231 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 KRT18P05783 430 aaKnown RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 GIT2Q14161 759 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 GNPTABQ3T906 1256 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 APTXQ7Z2E3 356 aaKnown RBP10.37□□□□□ -0.75
GNE-206ENST00000543356 SHCBP1Q8NEM2 672 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 MS4A4AQ96JQ5 239 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 BHMT2Q9H2M3 363 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 THAP9Q9H5L6 903 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 SLC39A2Q9NP94 309 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 PKD2L1Q9P0L9 805 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 LIMA1Q9UHB6 759 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms