RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 C1QTNF3-AMACRE9PGA6 284 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 GPR42O15529 346 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 B4GALT4O60513 344 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 TNFRSF1AP19438 455 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 EPHB4P54760 987 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 PPP2CBP62714 309 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 PPP2CAP67775 309 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 ICAM4Q14773 271 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 CD276Q5ZPR3 534 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 CHST13Q8NET6 341 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 ZNF669Q96BR6 464 aaPredicted RBP6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 PTPN18Q99952 460 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 BARX1Q9HBU1 254 aaPredicted RBP6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 ZFP69BQ9UJL9 534 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 MSRB2Q9Y3D2 182 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 TRAF6Q9Y4K3 522 aa6.68□□□□□ -1.34
CTHRC1-204ENST00000520880 NPEPPSL1A6NEC2 478 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 FAM47E-STBD1D6RA91 191 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 ACOT7O00154 380 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 MATN3O15232 486 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 KNG1P01042 644 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 GLRBP48167 497 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 EPHA5P54756 1037 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 PFKPQ01813 784 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 SMAD2Q15796 467 aaKnown RBP6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 ARHGEF18Q6ZSZ5 1173 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 KCTD1Q719H9 257 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 DVL3Q92997 716 aaPredicted RBP6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 SPATA9Q9BWV2 254 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 ADAM29Q9UKF5 820 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 NUB1Q9Y5A7 615 aa6.67□□□□□ -1.34
CTHRC1-204ENST00000520880 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 ADCY3O60266 1144 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 STK10O94804 968 aaKnown RBP6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 CKAP2LQ8IYA6 745 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 STPG3Q8N7X2 389 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 DNERQ8NFT8 737 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 SH3RF2Q8TEC5 729 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 ALG1Q9BT22 464 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 CD244Q9BZW8 370 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 CD248Q9HCU0 757 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 KCND1Q9NSA2 647 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 ARHGAP20Q9P2F6 1191 aa6.66□□□□□ -1.34
CTHRC1-204ENST00000520880 ZNF839A8K0R7 811 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 PDPK1O15530 556 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 FBXO21O94952 628 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 CDSNQ15517 529 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 Q6ZUG5 572 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 MEGF9Q9H1U4 602 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 JADE2Q9NQC1 790 aa6.65□□□□□ -1.34
CTHRC1-204ENST00000520880 IL18BPO95998 194 aa6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 CHGBP05060 677 aa6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 ENO2P09104 434 aaPredicted RBP6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 NAALADL2Q58DX5 795 aa6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 FOXB2Q5VYV0 432 aa6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 DPH6Q7L8W6 267 aa6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 PFDN2Q9UHV9 154 aa6.64□□□□□ -1.35
CTHRC1-204ENST00000520880 CCDC85CA6NKD9 419 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 U2SURPO15042 1029 aaKnown RBP6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 CNOT4O95628 575 aaKnown RBP6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 C6orf222P0C671 652 aaPredicted RBP6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 ZC3H6P61129 1189 aaKnown RBP6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 ZXDAP98168 799 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 PAK1Q13153 545 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 RASGRF1Q13972 1273 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 MTERF2Q49AM1 385 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 FAM209AQ5JX71 171 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 SLFN13Q68D06 897 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 GPR155Q7Z3F1 870 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 RALYLQ86SE5 291 aaKnown RBP6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 SCUBE1Q8IWY4 988 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 AJUBAQ96IF1 538 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 TACO1Q9BSH4 297 aaKnown RBP6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 SLC39A2Q9NP94 309 aa6.63□□□□□ -1.35
CTHRC1-204ENST00000520880 WNT9AO14904 365 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 DIAPH1O60610 1272 aaKnown RBP6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 CSF2RBP32927 897 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 SSRP1Q08945 709 aaKnown RBP6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 MAMDC2Q7Z304 686 aaPredicted RBP6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 SPRED1Q7Z699 444 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 MTDHQ86UE4 582 aaKnown RBP6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 SH3RF3Q8TEJ3 882 aaPredicted RBP6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 KISS1RQ969F8 398 aaPredicted RBP6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 WWC2-AS2Q96NR7 200 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 CDC6Q99741 560 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 KLC2Q9H0B6 622 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 SRPK3Q9UPE1 567 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 TSC22D4Q9Y3Q8 395 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 PCDHA8Q9Y5H6 950 aa6.62□□□□□ -1.35
CTHRC1-204ENST00000520880 TRBV23-1A0A0A0MS06 115 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 FAM90A27PA6NNH2 459 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 PATE3B3GLJ2 98 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 AQP7O14520 342 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 DBPQ10586 325 aaPredicted RBP6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 BTBD8Q5XKL5 378 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 ZNF585AQ6P3V2 769 aa6.61□□□□□ -1.35
CTHRC1-204ENST00000520880 ARHGAP36Q6ZRI8 547 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms