RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 KRIT1O00522 736 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 BUB1BO60566 1050 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 KATNA1O75449 491 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 LRG1P02750 347 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 PTPN1P18031 435 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 PMLP29590 882 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 MC3RP41968 323 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 STAT5AP42229 794 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 NCKAP1LP55160 1127 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 IL2P60568 153 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 CATSPEREQ5SY80 951 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 TMC6Q7Z403 805 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 IRF2BP1Q8IU81 584 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 CMIPQ8IY22 773 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 ANKRD13AQ8IZ07 590 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 ATL2Q8NHH9 583 aa6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 PDGFDQ9GZP0 370 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 DDX56Q9NY93 547 aaKnown RBP6.39□□□□□ -1.39
CTNNA1-222ENST00000520400 CLASP2O75122 1294 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 ASGR2P07307 311 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 LSSP48449 732 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 TMPRSS15P98073 1019 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 NR1I3Q14994 352 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 CR1LQ2VPA4 569 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 BRDTQ58F21 947 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 CYP4F22Q6NT55 531 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 NBPF11Q86T75 865 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 MIB1Q86YT6 1006 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 KIAA1958Q8N8K9 716 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 WDR66Q8TBY9 1149 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 USP7Q93009 1102 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 DIRC2Q96SL1 478 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 TTC1Q99614 292 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 SGPP1Q9BX95 441 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 AP5M1Q9H0R1 490 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 CCDC8Q9H0W5 538 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 IFT22Q9H7X7 185 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 ATP23Q9Y6H3 246 aa6.38□□□□□ -1.39
CTNNA1-222ENST00000520400 WASHC2CQ9Y4E1 1318 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 GAS7O60861 476 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 RAB11FIP3O75154 756 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 PRKD3O94806 890 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 C8BP07358 591 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 MMEP08473 750 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 ATF2P15336 505 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 TAL1P17542 331 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 IBSPP21815 317 aaPredicted RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 KIF11P52732 1056 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 ANAPC15P60006 121 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 SMAD3P84022 425 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 MTMR1Q13613 665 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 SMAD2Q15796 467 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 ARHGAP44Q17R89 818 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 PAN2Q504Q3 1202 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 BTBD8Q5XKL5 378 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 ZC3H14Q6PJT7 736 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 CLRN3Q8NCR9 226 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 PHOSPHO1Q8TCT1 267 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 MCOLN1Q9GZU1 580 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 SEMA4AQ9H3S1 761 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 RIC8BQ9NVN3 520 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 DBR1Q9UK59 544 aaKnown RBP6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 ZKSCAN5Q9Y2L8 839 aa6.37□□□□□ -1.39
CTNNA1-222ENST00000520400 IRS2Q9Y4H2 1338 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 ZEB2O60315 1214 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 FAHP16930 419 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 MC4RP32245 332 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 CDR1P51861 262 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 EPHB3P54753 998 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 TMEM132BQ14DG7 1078 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 CHRNA2Q15822 529 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 ATP13A4Q4VNC1 1196 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 FAM126BQ8IXS8 530 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 EFHBQ8N7U6 833 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 TTLL11Q8NHH1 800 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 ALG3Q92685 438 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 NSUN3Q9H649 340 aaKnown RBP6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 KCNH7Q9NS40 1196 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 BTBD7Q9P203 1132 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 MBD1Q9UIS9 605 aaPredicted RBP6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 MCM8Q9UJA3 840 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 NUDT5Q9UKK9 219 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 PCDHA5Q9Y5H7 936 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 SPO11Q9Y5K1 396 aa6.36□□□□□ -1.39
CTNNA1-222ENST00000520400 H7C1D1 291 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 BIN1O00499 593 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 MPIG6BO95866 241 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 GUCY2FP51841 1108 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 KPNA1P52294 538 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 SRSF3P84103 164 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 RTP5Q14D33 572 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 PLEKHG6Q3KR16 790 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 BROXQ5VW32 411 aa6.35□□□□□ -1.39
CTNNA1-222ENST00000520400 TEPPQ6URK8 271 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms