RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 CATIPQ7Z7H3 387 aa20.82■□□□□ 0.92
TFF3-204ENST00000518498 DBF4BQ8NFT6 615 aa20.82■□□□□ 0.92
TFF3-204ENST00000518498 IL31RAQ8NI17 732 aa20.82■□□□□ 0.92
TFF3-204ENST00000518498 ATP6V0A1Q93050 837 aa20.82■□□□□ 0.92
TFF3-204ENST00000518498 EPHX3Q9H6B9 360 aa20.82■□□□□ 0.92
TFF3-204ENST00000518498 TUT1Q9H6E5 874 aaKnown RBP20.82■□□□□ 0.92
TFF3-204ENST00000518498 TPCN1Q9ULQ1 816 aa20.82■□□□□ 0.92
TFF3-204ENST00000518498 GPKOWQ92917 476 aaPredicted RBP eCLIP20.81■□□□□ 0.92
TFF3-204ENST00000518498 SLKQ9H2G2 1235 aaPredicted RBP20.81■□□□□ 0.92
TFF3-204ENST00000518498 XIRP2A4UGR9 3374 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 PNMA6FA0A0J9YX94 578 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 ZBTB43O43298 467 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 DDAH1O94760 285 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 HSP90AA1P07900 732 aaKnown RBP20.8■□□□□ 0.92
TFF3-204ENST00000518498 GNPTABQ3T906 1256 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 PLEKHG4Q58EX7 1191 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 APOA5Q6Q788 366 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 FAM122AQ96E09 287 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 RNPEPQ9H4A4 650 aa20.8■□□□□ 0.92
TFF3-204ENST00000518498 NAP1L2Q9ULW6 460 aaPredicted RBP20.8■□□□□ 0.92
TFF3-204ENST00000518498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.79■□□□□ 0.92
TFF3-204ENST00000518498 GOLGA8BA8MQT2 603 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 NOP56O00567 594 aaKnown RBP20.79■□□□□ 0.92
TFF3-204ENST00000518498 PFKFB2O60825 505 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 SMIM10L2AP0DMW4 78 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 SMIM10L2BP0DMW5 78 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 PDIA3P30101 505 aaKnown RBP20.79■□□□□ 0.92
TFF3-204ENST00000518498 ME3Q16798 604 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 SLC35G1Q2M3R5 365 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 ZNF654Q8IZM8 581 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 MYOCDQ8IZQ8 938 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 FBXO22Q8NEZ5 403 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 MAP3K14Q99558 947 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 BCAS3Q9H6U6 928 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
TFF3-204ENST00000518498 COL4A4P53420 1690 aaPredicted RBP20.78■□□□□ 0.92
TFF3-204ENST00000518498 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 RBAK-RBAKDNI3L0D1 243 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 TREHO43280 583 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 CYTH3O43739 400 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 STAM2O75886 525 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 LGALS2P05162 132 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 GNAT1P11488 350 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 ICAM3P32942 547 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 PLA2G5P39877 138 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 HTRA4P83105 476 aaPredicted RBP20.78■□□□□ 0.92
TFF3-204ENST00000518498 CUL4AQ13619 759 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 NEDD9Q14511 834 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 SEPT8Q92599 483 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
TFF3-204ENST00000518498 LARP6Q9BRS8 491 aaKnown RBP20.78■□□□□ 0.92
TFF3-204ENST00000518498 C17orf80Q9BSJ5 609 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 LRFN3Q9BTN0 628 aa20.78■□□□□ 0.92
TFF3-204ENST00000518498 NID2Q14112 1375 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 SPATA31C2B4DYI2 1134 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 HOXC8P31273 242 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 METAP2P50579 478 aaKnown RBP eCLIP20.77■□□□□ 0.92
TFF3-204ENST00000518498 MRPS9P82933 396 aaKnown RBP20.77■□□□□ 0.92
TFF3-204ENST00000518498 TROAPQ12815 778 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 MKRN4PQ13434 485 aaPredicted RBP20.77■□□□□ 0.92
TFF3-204ENST00000518498 CPLX2Q6PUV4 134 aaKnown RBP20.77■□□□□ 0.92
TFF3-204ENST00000518498 GTF3C6Q969F1 213 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 UBE2ZQ9H832 354 aaPredicted RBP20.77■□□□□ 0.92
TFF3-204ENST00000518498 SENP2Q9HC62 589 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 RTEL1Q9NZ71 1219 aa20.77■□□□□ 0.92
TFF3-204ENST00000518498 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.77■□□□□ 0.92
TFF3-204ENST00000518498 GOLGA8AA7E2F4 631 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 CAND2O75155 1236 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 KIF5BP33176 963 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 TMEM31Q5JXX7 168 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 METTL7BQ6UX53 244 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 CYFIP1Q7L576 1253 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 SP7Q8TDD2 431 aaPredicted RBP20.76■□□□□ 0.91
TFF3-204ENST00000518498 TOP1MTQ969P6 601 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 SAMD11Q96NU1 681 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 SETD4Q9NVD3 440 aa20.76■□□□□ 0.91
TFF3-204ENST00000518498 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
TFF3-204ENST00000518498 BDP1A6H8Y1 2624 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 FIBPO43427 364 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 STK3Q13188 491 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 PTPROQ16827 1216 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 LEXMQ3ZCV2 418 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 MICU3Q86XE3 530 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 CTCFLQ8NI51 663 aaPredicted RBP20.75■□□□□ 0.91
TFF3-204ENST00000518498 PIBF1Q8WXW3 757 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 INPP4AQ96PE3 977 aaPredicted RBP20.75■□□□□ 0.91
TFF3-204ENST00000518498 GPR20Q99678 358 aa20.75■□□□□ 0.91
TFF3-204ENST00000518498 LLPHQ9BRT6 129 aaKnown RBP20.75■□□□□ 0.91
TFF3-204ENST00000518498 CPLX1O14810 134 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 CDKL5O76039 1030 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 UPP2O95045 317 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 LARGE1O95461 756 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 RTN1Q16799 776 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 EPC2Q52LR7 807 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 CCDC83Q8IWF9 413 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 FANCBQ8NB91 859 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
TFF3-204ENST00000518498 KHSRPQ92945 711 aaKnown RBP eCLIP20.74■□□□□ 0.91
TFF3-204ENST00000518498 MRPL38Q96DV4 380 aaKnown RBP20.74■□□□□ 0.91
TFF3-204ENST00000518498 YME1L1Q96TA2 773 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms