RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
MSH5-218ENST00000494646 BRF1Q92994 677 aa11□□□□□ -0.65
MSH5-218ENST00000494646 ZBED2Q9BTP6 218 aa11□□□□□ -0.65
MSH5-218ENST00000494646 COL25A1Q9BXS0 654 aaPredicted RBP11□□□□□ -0.65
MSH5-218ENST00000494646 TMEM260Q9NX78 707 aa11□□□□□ -0.65
MSH5-218ENST00000494646 UBIAD1Q9Y5Z9 338 aa11□□□□□ -0.65
MSH5-218ENST00000494646 RSPH10B2B2RC85 870 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 CXCL10P02778 98 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 CTSHP09668 335 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 RSPH10BP0C881 870 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 ARP10275 920 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 KCNA2P16389 499 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 METAP2P50579 478 aaKnown RBP eCLIP10.99□□□□□ -0.65
MSH5-218ENST00000494646 DEFB103AP81534 67 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 MTMR1Q13613 665 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 IKBKEQ14164 716 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 MBTPS1Q14703 1052 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 JAKMIP3Q5VZ66 844 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 FAM117BQ6P1L5 589 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 CNKSR3Q6P9H4 555 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 BLOC1S2Q6QNY1 142 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 GIMAP8Q8ND71 665 aaPredicted RBP10.99□□□□□ -0.65
MSH5-218ENST00000494646 DBF4BQ8NFT6 615 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 PHOSPHO2Q8TCD6 241 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 SEPT1Q8WYJ6 367 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 KCNB2Q92953 911 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 GPRASP2Q96D09 838 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 UIMC1Q96RL1 719 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 SLC9A7Q96T83 725 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 OSBPL7Q9BZF2 842 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 RIC8AQ9NPQ8 531 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 JADE2Q9NQC1 790 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 LOXHD1Q8IVV2 1947 aa10.99□□□□□ -0.65
MSH5-218ENST00000494646 CUL9Q8IWT3 2517 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 TCF20Q9UGU0 1960 aaKnown RBP10.98□□□□□ -0.65
MSH5-218ENST00000494646 LCHNA4D1U4 455 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 STXBP3O00186 592 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 ADAMTS3O15072 1205 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 TLL1O43897 1013 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 BAIAP3O94812 1187 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 ARHGEF15O94989 841 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 PARNO95453 639 aaKnown RBP10.98□□□□□ -0.65
MSH5-218ENST00000494646 GNAT1P11488 350 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 RPS6KB1P23443 525 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 MARK3P27448 753 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 ZNF76P36508 570 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 ADCY7P51828 1080 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 WDR5P61964 334 aaKnown RBP10.98□□□□□ -0.65
MSH5-218ENST00000494646 CCT2P78371 535 aaKnown RBP10.98□□□□□ -0.65
MSH5-218ENST00000494646 RBL2Q08999 1139 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.98□□□□□ -0.65
MSH5-218ENST00000494646 SPRED2Q7Z698 418 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 SERINC5Q86VE9 423 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 MICALL1Q8N3F8 863 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 ARNTL2Q8WYA1 636 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 GLG1Q92896 1179 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 PHKBQ93100 1093 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 CDHR1Q96JP9 859 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 MXRA8Q9BRK3 442 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 EHMT1Q9H9B1 1298 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 BARHL2Q9NY43 387 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
MSH5-218ENST00000494646 XIRP2A4UGR9 3374 aa10.98□□□□□ -0.65
MSH5-218ENST00000494646 MICAL3Q7RTP6 2002 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 EVPLQ92817 2033 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 PRRC2BQ5JSZ5 2229 aaKnown RBP10.97□□□□□ -0.65
MSH5-218ENST00000494646 LGR5O75473 907 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 NEFLP07196 543 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 TAP1Q03518 808 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
MSH5-218ENST00000494646 ANO3Q9BYT9 981 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 KCNH7Q9NS40 1196 aa10.97□□□□□ -0.65
MSH5-218ENST00000494646 MYH9P35579 1960 aaKnown RBP10.96□□□□□ -0.65
MSH5-218ENST00000494646 CCDC196A0A1B0GTZ2 297 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 ABHD14A-ACY1A0A1B0GW23 586 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 EPOPA6NHQ4 379 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.65
MSH5-218ENST00000494646 MAFGO15525 162 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 UPP2O95045 317 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 REC8O95072 547 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.65
MSH5-218ENST00000494646 PSMA5P28066 241 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 HOXC8P31273 242 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 IGBP1P78318 339 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 ADAM17P78536 824 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 PFKFB3Q16875 520 aaPredicted RBP10.96□□□□□ -0.65
MSH5-218ENST00000494646 KRT40Q6A162 431 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 RUFY4Q6ZNE9 571 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 LMBR1Q8WVP7 490 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 SLC9A2Q9UBY0 812 aa10.96□□□□□ -0.65
MSH5-218ENST00000494646 NRCAMQ92823 1304 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 PRPF3O43395 683 aaKnown RBP10.95□□□□□ -0.66
MSH5-218ENST00000494646 GJB5O95377 273 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 SCG2P13521 617 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 PDIA3P30101 505 aaKnown RBP10.95□□□□□ -0.66
MSH5-218ENST00000494646 CLK2P49760 499 aaKnown RBP10.95□□□□□ -0.66
MSH5-218ENST00000494646 AKAP17AQ02040 695 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms