RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 ALG3Q92685 438 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 USP7Q93009 1102 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 TTC1Q99614 292 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 FAM126AQ9BYI3 521 aaPredicted RBP5.51□□□□□ -1.53
CD46-216ENST00000490278 BCAS3Q9H6U6 928 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 DCP1AQ9NPI6 582 aaPredicted RBP5.51□□□□□ -1.53
CD46-216ENST00000490278 MCM8Q9UJA3 840 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 TELO2Q9Y4R8 837 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 LRRC10BA6NIK2 292 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 H7C1D1 291 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 BRINP1O60477 761 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 PEX10O60683 326 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 KRT37O76014 449 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 ZBTB48P10074 688 aaPredicted RBP5.5□□□□□ -1.53
CD46-216ENST00000490278 ATP2A2P16615 1042 aaKnown RBP5.5□□□□□ -1.53
CD46-216ENST00000490278 PTPN1P18031 435 aaKnown RBP5.5□□□□□ -1.53
CD46-216ENST00000490278 GJA4P35212 333 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 IL2P60568 153 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 GRIN1Q05586 938 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 BTBD8Q5XKL5 378 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 ETV3LQ6ZN32 361 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 AMIGO3Q86WK7 504 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 MIB1Q86YT6 1006 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 FAM126BQ8IXS8 530 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 TTLL11Q8NHH1 800 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 YIPF4Q9BSR8 244 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 IFT22Q9H7X7 185 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 RIC8BQ9NVN3 520 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 SIRT5Q9NXA8 310 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 DTLQ9NZJ0 730 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 ATP8A1Q9Y2Q0 1164 aa5.5□□□□□ -1.53
CD46-216ENST00000490278 MYOCOSA0A1B0GUC4 107 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 SCDO00767 359 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 ZEB2O60315 1214 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 FKBP9O95302 570 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 EYA4O95677 639 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 BPIP17213 487 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 PMLP29590 882 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 ADCYAP1R1P41586 468 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
CD46-216ENST00000490278 ANAPC15P60006 121 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 IGBP1P78318 339 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 OCRLQ01968 901 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 ZNF174Q15697 407 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 PAN2Q504Q3 1202 aaKnown RBP5.49□□□□□ -1.53
CD46-216ENST00000490278 CPZQ66K79 652 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 TMEM132EQ6IEE7 984 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 FSTL4Q6MZW2 842 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 FKBP9P1Q75LS8 142 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
CD46-216ENST00000490278 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 CHTF18Q8WVB6 975 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 TOE1Q96GM8 510 aaKnown RBP5.49□□□□□ -1.53
CD46-216ENST00000490278 GPR101Q96P66 508 aaPredicted RBP5.49□□□□□ -1.53
CD46-216ENST00000490278 MCOLN1Q9GZU1 580 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 KCNH7Q9NS40 1196 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 OXSMQ9NWU1 459 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 THG1LQ9NWX6 298 aaKnown RBP5.49□□□□□ -1.53
CD46-216ENST00000490278 PLA2G2DQ9UNK4 145 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 RNF114Q9Y508 228 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 B3GALT1Q9Y5Z6 326 aa5.49□□□□□ -1.53
CD46-216ENST00000490278 TEX51A0A1B0GUA7 166 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 FAM90A27PA6NNH2 459 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 NEMP1O14524 444 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 BUB1BO60566 1050 aaPredicted RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 ASGR2P07307 311 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 NCAM1P13591 858 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 CDK11BP21127 795 aaKnown RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 FBLN1P23142 703 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 LSSP48449 732 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 SEC23AQ15436 765 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 TARBP2Q15633 366 aaKnown RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 CREB3L3Q68CJ9 461 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 C11orf74Q86VG3 221 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 LDHDQ86WU2 507 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 FBXO15Q8NCQ5 510 aaPredicted RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 CPA5Q8WXQ8 436 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 DLG3Q92796 817 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 DDX11Q96FC9 970 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 PCIF1Q9H4Z3 704 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 KCNK12Q9HB15 430 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 NGRNQ9NPE2 291 aaKnown RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 MBD1Q9UIS9 605 aaPredicted RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 APOBEC2Q9Y235 224 aaKnown RBP5.48□□□□□ -1.53
CD46-216ENST00000490278 IRS2Q9Y4H2 1338 aa5.48□□□□□ -1.53
CD46-216ENST00000490278 PRAMEF25A6NGN4 478 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 ACOT7O00154 380 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 DVL2O14641 736 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 SEMA7AO75326 666 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 LRG1P02750 347 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 C4BPAP04003 597 aaKnown RBP5.47□□□□□ -1.53
CD46-216ENST00000490278 FAHP16930 419 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 KIF11P52732 1056 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 STAT4Q14765 748 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
CD46-216ENST00000490278 CC2D1AQ6P1N0 951 aaPredicted RBP5.47□□□□□ -1.53
CD46-216ENST00000490278 ZC3H18Q86VM9 953 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms