RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 TMTC3Q6ZXV5 915 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 MICAL3Q7RTP6 2002 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
VARS2-208ENST00000477052 EMSYQ7Z589 1322 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 CHRNA1P02708 482 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 CPA1P15085 419 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 LIFRP42702 1097 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 GNAQP50148 359 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 IGBP1P78318 339 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 WWC2Q6AWC2 1192 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 TMTC2Q8N394 836 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 SEPT8Q92599 483 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 HLA-CQ95604 372 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 SENP7Q9BQF6 1050 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
VARS2-208ENST00000477052 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 UBIAD1Q9Y5Z9 338 aa13.39□□□□□ -0.27
VARS2-208ENST00000477052 EFCAB14O75071 495 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 CALM1P0DP23 149 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 CALM2P0DP24 149 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 CALM3P0DP25 149 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 GHRP10912 638 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 GNAT1P11488 350 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 COL9A1P20849 921 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 HTRA4P83105 476 aaPredicted RBP13.38□□□□□ -0.27
VARS2-208ENST00000477052 PPFIA1Q13136 1202 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 MTMR1Q13613 665 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 XRRA1Q6P2D8 792 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 APOA5Q6Q788 366 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 GLG1Q92896 1179 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 GPRASP2Q96D09 838 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 MTA3Q9BTC8 594 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 SIP14410 1827 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
VARS2-208ENST00000477052 NCOR1O75376 2440 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 SPDYE3A6NKU9 549 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 ADAMTS3O15072 1205 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 CSPG5O95196 566 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 ARP10275 920 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 GRIK4Q16099 956 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 AAK1Q2M2I8 961 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 MARCH8Q5T0T0 291 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 DNAJB3Q8WWF6 145 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
VARS2-208ENST00000477052 TOP1MTQ969P6 601 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 PCYT2Q99447 389 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
VARS2-208ENST00000477052 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
VARS2-208ENST00000477052 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 NAP1L2Q9ULW6 460 aaPredicted RBP13.37□□□□□ -0.27
VARS2-208ENST00000477052 COG5Q9UP83 839 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 V9GY48 417 aaPredicted RBP13.37□□□□□ -0.27
VARS2-208ENST00000477052 NRCAMQ92823 1304 aa13.37□□□□□ -0.27
VARS2-208ENST00000477052 BRWD1Q9NSI6 2320 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 CDC27P30260 824 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 NAPAP54920 295 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
VARS2-208ENST00000477052 TMEM62Q0P6H9 643 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 FUT2Q10981 343 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 LPIN1Q14693 890 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
VARS2-208ENST00000477052 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
VARS2-208ENST00000477052 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
VARS2-208ENST00000477052 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 KLF18A0A0U1RQI7 1052 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
VARS2-208ENST00000477052 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 INSRRP14616 1297 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
VARS2-208ENST00000477052 KCNA5P22460 613 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 MGAT3Q09327 533 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 GPM6BQ13491 265 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 RTN1Q16799 776 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 MXRA8Q9BRK3 442 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
VARS2-208ENST00000477052 JPH1Q9HDC5 661 aaPredicted RBP13.35□□□□□ -0.27
VARS2-208ENST00000477052 CD320Q9NPF0 282 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 KCNH7Q9NS40 1196 aa13.35□□□□□ -0.27
VARS2-208ENST00000477052 FAM217BQ9NTX9 383 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms