RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
CPSF4-210ENST00000469897 GDPD5Q8WTR4 605 aa15.24■□□□□ 0.03
CPSF4-210ENST00000469897 SEPT8Q92599 483 aa15.24■□□□□ 0.03
CPSF4-210ENST00000469897 CDHR1Q96JP9 859 aa15.24■□□□□ 0.03
CPSF4-210ENST00000469897 V9GY48 417 aaPredicted RBP15.24■□□□□ 0.03
CPSF4-210ENST00000469897 CUL9Q8IWT3 2517 aa15.24■□□□□ 0.03
CPSF4-210ENST00000469897 NRCAMQ92823 1304 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 MARK3P27448 753 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 MTMR1Q13613 665 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 ADCK5Q3MIX3 580 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
CPSF4-210ENST00000469897 LMBR1Q8WVP7 490 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 TOP1MTQ969P6 601 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 C17orf80Q9BSJ5 609 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 JADE2Q9NQC1 790 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 COG5Q9UP83 839 aa15.23■□□□□ 0.03
CPSF4-210ENST00000469897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-210ENST00000469897 MAFGO15525 162 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 CAND2O75155 1236 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 CHRNA1P02708 482 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 HTRA4P83105 476 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-210ENST00000469897 FAM26DQ5JW98 314 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 WWC2Q6AWC2 1192 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 TYW1BQ6NUM6 668 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 APOA5Q6Q788 366 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 RUFY4Q6ZNE9 571 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 CENPQQ7L2Z9 268 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-210ENST00000469897 CYP2W1Q8TAV3 490 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 GLG1Q92896 1179 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 HLA-CQ95604 372 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 PGBD1Q96JS3 809 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 SCN5AQ14524 2016 aa15.22■□□□□ 0.03
CPSF4-210ENST00000469897 ZBTB43O43298 467 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 NAPAP54920 295 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 PPFIA1Q13136 1202 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 TSGA10IPQ3SY00 556 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 MARCH8Q5T0T0 291 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 ZBTB10Q96DT7 871 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 MXRA8Q9BRK3 442 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 SMARCAD1Q9H4L7 1026 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 KCNH7Q9NS40 1196 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
CPSF4-210ENST00000469897 ERAP1Q9NZ08 941 aa15.21■□□□□ 0.03
CPSF4-210ENST00000469897 SMCO2A6NFE2 343 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 ARP10275 920 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 IGBP1P78318 339 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 FUT2Q10981 343 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 GRIK4Q16099 956 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 RTN1Q16799 776 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 DNAJB3Q8WWF6 145 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 YME1L1Q96TA2 773 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 PCYT2Q99447 389 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 IFIH1Q9BYX4 1025 aaKnown RBP15.2■□□□□ 0.02
CPSF4-210ENST00000469897 EHMT1Q9H9B1 1298 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 RIC8AQ9NPQ8 531 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 FAM217BQ9NTX9 383 aaPredicted RBP15.2■□□□□ 0.02
CPSF4-210ENST00000469897 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
CPSF4-210ENST00000469897 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
CPSF4-210ENST00000469897 KLF18A0A0U1RQI7 1052 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 ENPP3O14638 875 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 GHRP10912 638 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 INSRRP14616 1297 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 CPA1P15085 419 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 CDC27P30260 824 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 ADD1P35611 737 aaKnown RBP15.19■□□□□ 0.02
CPSF4-210ENST00000469897 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 TAF2Q6P1X5 1199 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 RPAINQ86UA6 219 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 SP7Q8TDD2 431 aaPredicted RBP15.19■□□□□ 0.02
CPSF4-210ENST00000469897 APBB2Q92870 758 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
CPSF4-210ENST00000469897 SLC9A2Q9UBY0 812 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 CHD7Q9P2D1 2997 aa15.19■□□□□ 0.02
CPSF4-210ENST00000469897 CNTNAP5Q8WYK1 1306 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 GOLGA8AA7E2F4 631 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 GOLGA8BA8MQT2 603 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 STXBP3O00186 592 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 CDC45O75419 566 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 FOSP01100 380 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-210ENST00000469897 MGAT3Q09327 533 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 KRT32Q14532 448 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 LPIN1Q14693 890 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 RSPH3Q86UC2 560 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 AZI2Q9H6S1 392 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 TUBE1Q9UJT0 475 aa15.18■□□□□ 0.02
CPSF4-210ENST00000469897 MBLAC1A4D2B0 266 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-210ENST00000469897 RRN3P2A6NIE6 340 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 ZNF76P36508 570 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 STAT5BP51692 787 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 ADCY7P51828 1080 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 ACTR2P61160 394 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 FGD1P98174 961 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 CEP55Q53EZ4 464 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 TMEM192Q8IY95 271 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 IL17RAQ96F46 866 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 SDF4Q9BRK5 362 aa15.17■□□□□ 0.02
CPSF4-210ENST00000469897 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms