RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CTSHP09668 335 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 POLR2MP0CAP2 368 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 TROAPQ12815 778 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 NEDD9Q14511 834 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 GRM4Q14833 912 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 BMP8AQ7Z5Y6 402 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 TRIM50Q86XT4 487 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 PIGSQ96S52 555 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 SENP7Q9BQF6 1050 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 C11orf84Q9BUA3 381 aaPredicted RBP14.14□□□□□ -0.15
UBR4-211ENST00000467272 KRT23Q9C075 422 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 CNNM2Q9H8M5 875 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 CLDND1Q9NY35 253 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 ADGRA3Q8IWK6 1321 aa14.14□□□□□ -0.15
UBR4-211ENST00000467272 MYH7BA7E2Y1 1941 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 TRIM6-TRIM34B2RNG4 842 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
UBR4-211ENST00000467272 MMP1P03956 469 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 GNAT1P11488 350 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 GTF2F1P35269 517 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBR4-211ENST00000467272 RRP1P56182 461 aaKnown RBP14.13□□□□□ -0.15
UBR4-211ENST00000467272 ADAM15Q13444 863 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 LPIN1Q14693 890 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 IMMTQ16891 758 aaKnown RBP14.13□□□□□ -0.15
UBR4-211ENST00000467272 MARCH8Q5T0T0 291 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 IFIT1BQ5T764 474 aaKnown RBP14.13□□□□□ -0.15
UBR4-211ENST00000467272 CWC27Q6UX04 472 aaKnown RBP14.13□□□□□ -0.15
UBR4-211ENST00000467272 RUFY4Q6ZNE9 571 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 CYFIP1Q7L576 1253 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 FIBCD1Q8N539 461 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 LINC01599Q8WXQ3 324 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 RILPL2Q969X0 211 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 LNPKQ9C0E8 428 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 SENP2Q9HC62 589 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
UBR4-211ENST00000467272 ZDBF2Q9HCK1 2354 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 NRCAMQ92823 1304 aa14.13□□□□□ -0.15
UBR4-211ENST00000467272 PNMA6FA0A0J9YX94 578 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 FIBPO43427 364 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 DGKIO75912 1065 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 DNAJB1P25685 340 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 CTNNB1P35222 781 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 SMAD4Q13485 552 aaKnown RBP14.12□□□□□ -0.15
UBR4-211ENST00000467272 CBX2Q14781 532 aaPredicted RBP14.12□□□□□ -0.15
UBR4-211ENST00000467272 CSPP1Q1MSJ5 1256 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 RNF135Q8IUD6 432 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 EDAQ92838 391 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 UBAC1Q9BSL1 405 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 PLVAPQ9BX97 442 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 UPF3BQ9BZI7 483 aaKnown RBP14.12□□□□□ -0.15
UBR4-211ENST00000467272 CLEC1BQ9P126 229 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 MUTYHQ9UIF7 546 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 RWDD3Q9Y3V2 267 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
UBR4-211ENST00000467272 LOC730098B7Z3J9 87 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 PIK3CDO00329 1044 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 LINC01565O15544 149 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 NUCB1Q02818 461 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 TRAF1Q13077 416 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 GNPTABQ3T906 1256 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 FBXO47Q5MNV8 452 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 PCNX4Q63HM2 1172 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 TAF2Q6P1X5 1199 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 RTN4RL1Q86UN2 441 aaPredicted RBP14.11□□□□□ -0.15
UBR4-211ENST00000467272 FCHSD1Q86WN1 690 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 P2RX5Q93086 422 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 MFSD14AQ96MC6 490 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 PLAGL2Q9UPG8 496 aa14.11□□□□□ -0.15
UBR4-211ENST00000467272 TTC3P53804 2025 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 MYH6P13533 1939 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 NOP56O00567 594 aaKnown RBP14.1□□□□□ -0.15
UBR4-211ENST00000467272 MEIS2O14770 477 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 GHRP10912 638 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 KCNA2P16389 499 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 ARHGAP4P98171 946 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 COASYQ13057 564 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 CHD1LQ86WJ1 897 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 SMRP1Q8NCR6 262 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 PRSS33Q8NF86 280 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
UBR4-211ENST00000467272 POP1Q99575 1024 aaKnown RBP14.1□□□□□ -0.15
UBR4-211ENST00000467272 AGO3Q9H9G7 860 aaKnown RBP14.1□□□□□ -0.15
UBR4-211ENST00000467272 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
UBR4-211ENST00000467272 ZNF215Q9UL58 517 aaPredicted RBP14.1□□□□□ -0.15
UBR4-211ENST00000467272 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 HIP1O00291 1037 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 ATP9AO75110 1047 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 ITGB1P05556 798 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 NAALADL2Q58DX5 795 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 HOMER1Q86YM7 354 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 EFHBQ8N7U6 833 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 SPPL3Q8TCT6 385 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 RTEL1Q9NZ71 1219 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 CD207Q9UJ71 328 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 MRPL42Q9Y6G3 142 aaKnown RBP14.09□□□□□ -0.15
UBR4-211ENST00000467272 TAF6LQ9Y6J9 622 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 SQORQ9Y6N5 450 aa14.09□□□□□ -0.15
UBR4-211ENST00000467272 SPTBN4Q9H254 2564 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms