RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 SLC5A5Q92911 643 aa26.4■■□□□ 1.82
SUMO3-205ENST00000466861 INTS4Q96HW7 963 aaKnown RBP26.4■■□□□ 1.82
SUMO3-205ENST00000466861 SMARCAD1Q9H4L7 1026 aa26.4■■□□□ 1.82
SUMO3-205ENST00000466861 DDX25Q9UHL0 483 aaKnown RBP26.4■■□□□ 1.82
SUMO3-205ENST00000466861 ZMYND8Q9ULU4 1186 aaPredicted RBP26.4■■□□□ 1.82
SUMO3-205ENST00000466861 DNAH12Q6ZR08 3092 aa26.4■■□□□ 1.82
SUMO3-205ENST00000466861 TBX3O15119 743 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 MSH4O15457 936 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 TDP2O95551 362 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 SP4Q02446 784 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 FAM47CQ5HY64 1035 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 FAM20AQ96MK3 541 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 ERAP1Q9NZ08 941 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 GTF2IRD1Q9UHL9 959 aa26.39■■□□□ 1.82
SUMO3-205ENST00000466861 LTBP2Q14767 1821 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 K7ELQ4 463 aaPredicted RBP26.38■■□□□ 1.81
SUMO3-205ENST00000466861 B4GALT4O60513 344 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 GJB2P29033 226 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 SLC26A2P50443 739 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 GUCY1B3Q02153 619 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 EARS2Q5JPH6 523 aaKnown RBP26.38■■□□□ 1.81
SUMO3-205ENST00000466861 PLPPR4Q7Z2D5 763 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 TNPO1Q92973 898 aaKnown RBP26.38■■□□□ 1.81
SUMO3-205ENST00000466861 AZI2Q9H6S1 392 aa26.38■■□□□ 1.81
SUMO3-205ENST00000466861 PRDM5Q9NQX1 630 aaPredicted RBP26.38■■□□□ 1.81
SUMO3-205ENST00000466861 IGKV6D-21A0A0A0MT36 114 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 TRIM43BA6NCK2 446 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 FOSBP53539 338 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 ORC2Q13416 577 aaPredicted RBP26.37■■□□□ 1.81
SUMO3-205ENST00000466861 UTP14CQ5TAP6 766 aaKnown RBP26.37■■□□□ 1.81
SUMO3-205ENST00000466861 ABHD15Q6UXT9 468 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 RDM1Q8NG50 284 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 ETNPPLQ8TBG4 499 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 TRIM43Q96BQ3 446 aaPredicted RBP26.37■■□□□ 1.81
SUMO3-205ENST00000466861 LBHD1Q9BQE6 289 aaPredicted RBP26.37■■□□□ 1.81
SUMO3-205ENST00000466861 TEKT3Q9BXF9 490 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 HDAC6Q9UBN7 1215 aa26.37■■□□□ 1.81
SUMO3-205ENST00000466861 MYH9P35579 1960 aaKnown RBP26.37■■□□□ 1.81
SUMO3-205ENST00000466861 CCNT1O60563 726 aaKnown RBP26.36■■□□□ 1.81
SUMO3-205ENST00000466861 GAS7O60861 476 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 GNAT1P11488 350 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 SYN1P17600 705 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 U2AF2P26368 475 aaKnown RBP eCLIP26.36■■□□□ 1.81
SUMO3-205ENST00000466861 HOXC8P31273 242 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 BMP8BP34820 402 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 MIS18BP1Q6P0N0 1132 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 SH3RF1Q7Z6J0 888 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 AFAP1L1Q8TED9 768 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 GDF15Q99988 308 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 TRPV6Q9H1D0 765 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 KCNMB3Q9NPA1 279 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 TELO2Q9Y4R8 837 aa26.36■■□□□ 1.81
SUMO3-205ENST00000466861 PSMD10O75832 226 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 CCNE2O96020 404 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 TIMP1P01033 207 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 RAG1P15918 1043 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 SFNP31947 248 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 TRAPPC10P48553 1259 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 LRCH2Q5VUJ6 765 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 FAM160B1Q5W0V3 765 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 GLG1Q92896 1179 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 WDR81Q562E7 1941 aa26.35■■□□□ 1.81
SUMO3-205ENST00000466861 WDR64B1ANS9 1081 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 STAT5BP51692 787 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 JAK3P52333 1124 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 GNL2Q13823 731 aaKnown RBP26.34■■□□□ 1.81
SUMO3-205ENST00000466861 PTGISQ16647 500 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 GDF6Q6KF10 455 aaPredicted RBP26.34■■□□□ 1.81
SUMO3-205ENST00000466861 TRIM50Q86XT4 487 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 NOSTRINQ8IVI9 506 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 SLFN12Q8IYM2 578 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 PCYT2Q99447 389 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 TRMT13Q9NUP7 481 aaKnown RBP26.34■■□□□ 1.81
SUMO3-205ENST00000466861 NOD1Q9Y239 953 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 PCDHA10Q9Y5I2 948 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 TRIP12Q14669 1992 aaPredicted RBP26.34■■□□□ 1.81
SUMO3-205ENST00000466861 NRCAMQ92823 1304 aa26.34■■□□□ 1.81
SUMO3-205ENST00000466861 FAM205CA6NFA0 338 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 DDX39AO00148 427 aaKnown RBP26.33■■□□□ 1.81
SUMO3-205ENST00000466861 SLC37A4O43826 429 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 BAG4O95429 457 aaKnown RBP26.33■■□□□ 1.81
SUMO3-205ENST00000466861 PSAPP07602 524 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 SMIM10L2AP0DMW4 78 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 SMIM10L2BP0DMW5 78 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 PDCP20941 246 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 B3GNT9Q6UX72 402 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 CCDC155Q8N6L0 562 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 PRO3102Q9H379 93 aa26.33■■□□□ 1.81
SUMO3-205ENST00000466861 A0A1W2PPC1 479 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 C17orf102A2RUQ5 167 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 PITPNM1O00562 1244 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 MAGEA10P43363 369 aaPredicted RBP26.32■■□□□ 1.8
SUMO3-205ENST00000466861 CHMP4BP1P59074 171 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 RBL2Q08999 1139 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 HSCBQ8IWL3 235 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 CAGE1Q8TC20 777 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 NOC4LQ9BVI4 516 aaKnown RBP26.32■■□□□ 1.8
SUMO3-205ENST00000466861 HIPK3Q9H422 1215 aa26.32■■□□□ 1.8
SUMO3-205ENST00000466861 NOL7Q9UMY1 257 aaKnown RBP26.32■■□□□ 1.8
SUMO3-205ENST00000466861 H3BQV1 296 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms