RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 FAM13BQ9NYF5 915 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 DDX25Q9UHL0 483 aaKnown RBP13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 HPSEQ9Y251 543 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
AC009404.1-202ENST00000439955 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 STRNO43815 780 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 TDP2O95551 362 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 BMP1P13497 986 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 PFKFB1P16118 471 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 LIG1P18858 919 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 KCNQ1P51787 676 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 RPS6P62753 249 aaKnown RBP13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 Q4G0T1 1027 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 CAVIN1Q6NZI2 390 aaKnown RBP13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 DTHD1Q6ZMT9 781 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 FCHSD1Q86WN1 690 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 FMR1NBQ8N0W7 255 aaPredicted RBP13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 ENGASEQ8NFI3 743 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 TBC1D5Q92609 795 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 AK8Q96MA6 479 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 LRFN3Q9BTN0 628 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 TMEM60Q9H2L4 133 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 NKX2-4Q9H2Z4 354 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 GOLPH3LQ9H4A5 285 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 HOMER2Q9NSB8 354 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 TMEM63CQ9P1W3 806 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 HCN4Q9Y3Q4 1203 aa13.23□□□□□ -0.29
AC009404.1-202ENST00000439955 XIRP2A4UGR9 3374 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 VWA3AA6NCI4 1184 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 SLC37A4O43826 429 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 LETM1O95202 739 aaPredicted RBP13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 TIMP1P01033 207 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 PGK2P07205 417 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 CSF2RAP15509 400 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 SETQ01105 290 aaPredicted RBP13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 CALCRLQ16602 461 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 NSMFQ6X4W1 530 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 ZNF365Q70YC5 407 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 NIPA1Q7RTP0 329 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 RAB34Q9BZG1 259 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 CSRNP2Q9H175 543 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 KCNMB3Q9NPA1 279 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 A1CFQ9NQ94 594 aaKnown RBP13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 SLC5A4Q9NY91 659 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 DACT1Q9NYF0 836 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
AC009404.1-202ENST00000439955 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 KINO60870 393 aaKnown RBP13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 NR1I2O75469 434 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 SYKP43405 635 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 NDUFA8P51970 172 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 ACLYP53396 1101 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 GRIN1Q05586 938 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 BAATQ14032 418 aaPredicted RBP13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 PDIA5Q14554 519 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 SKIV2LQ15477 1246 aaKnown RBP13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 DNERQ8NFT8 737 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 NUP62CLQ9H1M0 184 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 CLSTN2Q9H4D0 955 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 MROH8Q9H579 483 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 PXMP2Q9NR77 195 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 COL20A1Q9P218 1284 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 USP25Q9UHP3 1055 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 MSRAQ9UJ68 235 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 TBX21Q9UL17 535 aa13.21□□□□□ -0.29
AC009404.1-202ENST00000439955 SYNGAP1Q96PV0 1343 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 LCTP09848 1927 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 IGLV3-22A0A075B6J6 115 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 CTAGE5O15320 804 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 SLC26A4O43511 780 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 STAM2O75886 525 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 ZNF76P36508 570 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 TXLNAP40222 546 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 PPIGQ13427 754 aaKnown RBP eCLIP13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 IL17AQ16552 155 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 ZSCAN23Q3MJ62 389 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 RASIP1Q5U651 963 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 ELOA2Q8IYF1 753 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms