RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 RIC8AQ9NPQ8 531 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 JADE2Q9NQC1 790 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 TELO2Q9Y4R8 837 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 UBIAD1Q9Y5Z9 338 aa21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 V9GY48 417 aaPredicted RBP21.12■□□□□ 0.97
AC004540.1-201ENST00000439120 NRCAMQ92823 1304 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 RFXAPO00287 272 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 GJB5O95377 273 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 FOSP01100 380 aaPredicted RBP21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 AMHP03971 560 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 SKIV2LQ15477 1246 aaKnown RBP21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 TCTN1Q2MV58 587 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 FAM117BQ6P1L5 589 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 DBF4BQ8NFT6 615 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 LMBR1Q8WVP7 490 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 SEPT8Q92599 483 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 RAD9AQ99638 391 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 GLT8D2Q9H1C3 349 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 ERAP1Q9NZ08 941 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 KAT6AQ92794 2004 aa21.11■□□□□ 0.97
AC004540.1-201ENST00000439120 CUL9Q8IWT3 2517 aa21.1■□□□□ 0.97
AC004540.1-201ENST00000439120 CCDC196A0A1B0GTZ2 297 aa21.1■□□□□ 0.97
AC004540.1-201ENST00000439120 MARK3P27448 753 aa21.1■□□□□ 0.97
AC004540.1-201ENST00000439120 METAP2P50579 478 aaKnown RBP eCLIP21.1■□□□□ 0.97
AC004540.1-201ENST00000439120 RCAN1P53805 252 aa21.1■□□□□ 0.97
AC004540.1-201ENST00000439120 JAKMIP1Q96N16 626 aaKnown RBP21.1■□□□□ 0.97
AC004540.1-201ENST00000439120 LCHNA4D1U4 455 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 SMCO2A6NFE2 343 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 ARHGEF15O94989 841 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 MRPS5P82675 430 aaKnown RBP21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 FUT2Q10981 343 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 PPFIA1Q13136 1202 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 PLEKHG4Q58EX7 1191 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 BLOC1S2Q6QNY1 142 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 MYOCDQ8IZQ8 938 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 MXRA8Q9BRK3 442 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 SDF4Q9BRK5 362 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 SMARCAD1Q9H4L7 1026 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 JPH1Q9HDC5 661 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 BARHL2Q9NY43 387 aa21.09■□□□□ 0.97
AC004540.1-201ENST00000439120 STXBP3O00186 592 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 REC8O95072 547 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 VCANP13611 3396 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 ZNF76P36508 570 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 TYW1BQ6NUM6 668 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 Q6ZUG5 572 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 RSPH3Q86UC2 560 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 PGBD1Q96JS3 809 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 ANO3Q9BYT9 981 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 AZI2Q9H6S1 392 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 KCNH7Q9NS40 1196 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 SLC9A2Q9UBY0 812 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 MTCH2Q9Y6C9 303 aa21.08■□□□□ 0.97
AC004540.1-201ENST00000439120 MICAL3Q7RTP6 2002 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 GSTTP1A0A1W2PQM5 241 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 EPOPA6NHQ4 379 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 CPA1P15085 419 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 CDC27P30260 824 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 APOBRQ0VD83 1088 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 AP3B2Q13367 1082 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 TAF2Q6P1X5 1199 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 APBB2Q92870 758 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 BRF1Q92994 677 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 ASB2Q96Q27 587 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 TUBE1Q9UJT0 475 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 MTUS1Q9ULD2 1270 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 INSL6Q9Y581 213 aa21.07■□□□□ 0.96
AC004540.1-201ENST00000439120 POU3F3P20264 500 aaPredicted RBP21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 PSMA5P28066 241 aa21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 HSPA4P34932 840 aa21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 ADAM17P78536 824 aa21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 GRIK4Q16099 956 aa21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 CEP55Q53EZ4 464 aa21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 TNPO1Q92973 898 aaKnown RBP21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 TGS1Q96RS0 853 aaKnown RBP21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 FAM217BQ9NTX9 383 aaPredicted RBP21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 SNX14Q9Y5W7 946 aa21.06■□□□□ 0.96
AC004540.1-201ENST00000439120 COL4A4P53420 1690 aaPredicted RBP21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 SCG2P13521 617 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 ADD1P35611 737 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 IGBP1P78318 339 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 AKAP17AQ02040 695 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 GRB10Q13322 594 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 PFKFB3Q16875 520 aaPredicted RBP21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 AAK1Q2M2I8 961 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 CCDC12Q8WUD4 166 aaPredicted RBP21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 KCNB2Q92953 911 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 IFIH1Q9BYX4 1025 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 TMEM260Q9NX78 707 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 TRPC6Q9Y210 931 aa21.05■□□□□ 0.96
AC004540.1-201ENST00000439120 NFASCO94856 1347 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 LINC01553A4QN01 128 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 SREBF1P36956 1147 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 FAM26DQ5JW98 314 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 RUFY4Q6ZNE9 571 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 SPRED2Q7Z698 418 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 CYP2W1Q8TAV3 490 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 GDPD5Q8WTR4 605 aa21.04■□□□□ 0.96
AC004540.1-201ENST00000439120 YME1L1Q96TA2 773 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms