RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PMS1P54277 932 aaKnown RBP24.63■■□□□ 1.53
VSX1-205ENST00000429762 EPHA7Q15375 998 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 SPATA1Q5VX52 437 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 LRRC27Q9C0I9 530 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 POLD4Q9HCU8 107 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 PFASO15067 1338 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 SOWAHBA6NEL2 793 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 UNCXA6NJT0 531 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 PGK2P07205 417 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 PTPN21Q16825 1174 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 SPRYD7Q5W111 196 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 CHADLQ6NUI6 762 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 GLIS3Q8NEA6 775 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 ZNF830Q96NB3 372 aaPredicted RBP24.63■■□□□ 1.53
VSX1-205ENST00000429762 RWDD2AQ9UIY3 292 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 SAMM50Q9Y512 469 aa24.63■■□□□ 1.53
VSX1-205ENST00000429762 PVALEFA0A1B0GWK0 134 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 DCAF8L1A6NGE4 600 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 POTEB2H3BUK9 544 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 SERPINC1P01008 464 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 KRT18P05783 430 aaKnown RBP24.62■■□□□ 1.53
VSX1-205ENST00000429762 ZNF18P17022 549 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 ALDH5A1P51649 535 aaPredicted RBP24.62■■□□□ 1.53
VSX1-205ENST00000429762 COASYQ13057 564 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 CT47A1Q5JQC4 288 aaPredicted RBP24.62■■□□□ 1.53
VSX1-205ENST00000429762 XRRA1Q6P2D8 792 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 INPP4AQ96PE3 977 aaPredicted RBP24.62■■□□□ 1.53
VSX1-205ENST00000429762 LXNQ9BS40 222 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 PANK4Q9NVE7 773 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 TBC1D7Q9P0N9 293 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 CNNM4Q6P4Q7 775 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 NLRX1Q86UT6 975 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 FAM43AQ8N2R8 423 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 SYT2Q8N9I0 419 aaPredicted RBP24.62■■□□□ 1.53
VSX1-205ENST00000429762 SMCR8Q8TEV9 937 aaPredicted RBP24.62■■□□□ 1.53
VSX1-205ENST00000429762 MRFAP1L1Q96HT8 127 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 RUSC1Q9BVN2 902 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 TELO2Q9Y4R8 837 aa24.62■■□□□ 1.53
VSX1-205ENST00000429762 CCNE2O96020 404 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 HUNKP57058 714 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 ERVK-9P63128 1117 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 ERVK-24P63145 666 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 LRRC41Q15345 812 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 TPD52L1Q16890 204 aaPredicted RBP24.61■■□□□ 1.53
VSX1-205ENST00000429762 GPRASP2Q96D09 838 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 FGFBP2Q9BYJ0 223 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 ZHX3Q9H4I2 956 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 TRPM7Q96QT4 1865 aa24.61■■□□□ 1.53
VSX1-205ENST00000429762 EYA4O95677 639 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 SLC25A27O95847 323 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 CDK11BP21127 795 aaKnown RBP24.6■■□□□ 1.53
VSX1-205ENST00000429762 NAP1L5Q96NT1 182 aaPredicted RBP24.6■■□□□ 1.53
VSX1-205ENST00000429762 PORCNQ9H237 461 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 BMP2KQ9NSY1 1161 aaPredicted RBP24.6■■□□□ 1.53
VSX1-205ENST00000429762 TBC1D22BQ9NU19 505 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 PNMA3Q9UL41 463 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 CDC25BP30305 580 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.6■■□□□ 1.53
VSX1-205ENST00000429762 ANKRD13CQ8N6S4 541 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 EFCC1Q9HA90 598 aa24.6■■□□□ 1.53
VSX1-205ENST00000429762 UBASH3AP57075 661 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 SP4Q02446 784 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 EHHADHQ08426 723 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 STIM1Q13586 685 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 UGCGQ16739 394 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 CCDC144BQ3MJ40 725 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 DNERQ8NFT8 737 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 MMP19Q99542 508 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 PTPN18Q99952 460 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 REEP2Q9BRK0 252 aa24.59■■□□□ 1.53
VSX1-205ENST00000429762 RSPH10B2B2RC85 870 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 PSMA7O14818 248 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 RSPH10BP0C881 870 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 KCNA2P16389 499 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 PTGS1P23219 599 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 GIT2Q14161 759 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 SEPT14Q6ZU15 432 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 TRMT1LQ7Z2T5 733 aaKnown RBP24.58■■□□□ 1.53
VSX1-205ENST00000429762 FAM133AQ8N9E0 248 aa24.58■■□□□ 1.53
VSX1-205ENST00000429762 STXBP2Q15833 593 aa24.58■■□□□ 1.52
VSX1-205ENST00000429762 CDKAL1Q5VV42 579 aa24.58■■□□□ 1.52
VSX1-205ENST00000429762 IWS1Q96ST2 819 aa24.58■■□□□ 1.52
VSX1-205ENST00000429762 EEPD1Q7L9B9 569 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 CCDC186Q7Z3E2 898 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 ANKRD23Q86SG2 305 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 CCDC65Q8IXS2 484 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 FGD4Q96M96 766 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 MAF1Q9H063 256 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 INTS13Q9NVM9 706 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 TCEAL9Q9UHQ7 104 aa24.57■■□□□ 1.52
VSX1-205ENST00000429762 LRRC37A2A6NM11 1700 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 SP2Q02086 613 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 HERC4Q5GLZ8 1057 aaPredicted RBP24.56■■□□□ 1.52
VSX1-205ENST00000429762 RINT1Q6NUQ1 792 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 EEF2KMTQ96G04 330 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 TRIM47Q96LD4 638 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 NACC1Q96RE7 527 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.56■■□□□ 1.52
VSX1-205ENST00000429762 TMEM150BA6NC51 233 aa24.56■■□□□ 1.52
VSX1-205ENST00000429762 P4HBP07237 508 aaKnown RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms