RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ANKS4BQ8N8V4 417 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 P2RX5Q93086 422 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 THAP9Q9H5L6 903 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 SHANK3Q9BYB0 1731 aa12.35□□□□□ -0.43
SEC61A1-202ENST00000424880 A0A087X0T9 212 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 ERVV-2B6SEH9 535 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 FAM228BP0C875 321 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 ATP4AP20648 1035 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 PRPF4BQ13523 1007 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 P3H4Q92791 437 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 KLHL29Q96CT2 875 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 NKX1-2Q9UD57 310 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 STAG2Q8N3U4 1231 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 INPP4AQ96PE3 977 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 PAPOLBQ9NRJ5 636 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 DBR1Q9UK59 544 aaKnown RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 CORO1CQ9ULV4 474 aaPredicted RBP12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 RPS6KL1Q9Y6S9 549 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 MYH7BA7E2Y1 1941 aa12.34□□□□□ -0.43
SEC61A1-202ENST00000424880 FESP07332 822 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 NEFHP12036 1026 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 RANBP1P43487 201 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 POLR2FP61218 127 aaKnown RBP12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 SLC30A9Q6PML9 568 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 MREGQ8N565 214 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 FAM133AQ8N9E0 248 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 ISCUQ9H1K1 167 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 SEMA6BQ9H3T3 888 aa12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 DDX60Q8IY21 1712 aaKnown RBP12.33□□□□□ -0.43
SEC61A1-202ENST00000424880 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 AHCYL1O43865 530 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 TLR2O60603 784 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 CREB1P16220 341 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 TBC1D25Q3MII6 688 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 ENAHQ8N8S7 591 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 AZI2Q9H6S1 392 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 GREM2Q9H772 168 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 SAMD15Q9P1V8 674 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 ABCF2Q9UG63 623 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 SLC12A4Q9UP95 1085 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 GRID2IPA4D2P6 1211 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 KRIT1O00522 736 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 POLE2P56282 527 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 SESN3P58005 492 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 FGFR1OP2Q9NVK5 253 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 TBC1D7Q9P0N9 293 aa12.33□□□□□ -0.44
SEC61A1-202ENST00000424880 C5orf60A6NFR6 353 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 COQ9O75208 318 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 RARAP10276 462 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 ERFP50548 548 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 NCALDP61601 193 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 TNNC1P63316 161 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 RIPK1Q13546 671 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 INF2Q27J81 1249 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 TAF4BQ92750 862 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 GLG1Q92896 1179 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 ZNF317Q96PQ6 595 aaPredicted RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 RTCBQ9Y3I0 505 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 MYH1P12882 1939 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 GHRP10912 638 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 PLCG1P19174 1290 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 PAPOLAP51003 745 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 MXRA7P84157 204 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 VWA3BQ502W6 1294 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 HGSNATQ68CP4 663 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 GDAP1Q8TB36 358 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 KRT23Q9C075 422 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 SIK3Q9Y2K2 1263 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 TCRBV5S4A2TA0A5A2 114 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 PCK1P35558 622 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 PPP1R15BQ5SWA1 713 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 IFIT1BQ5T764 474 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 FAM129AQ9BZQ8 928 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 INTS9Q9NV88 658 aaKnown RBP12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 ADAM22Q9P0K1 906 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 MYH7P12883 1935 aa12.32□□□□□ -0.44
SEC61A1-202ENST00000424880 ATP2A2P16615 1042 aaKnown RBP12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 PLTPP55058 493 aa12.31□□□□□ -0.44
SEC61A1-202ENST00000424880 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms