RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CCDC62Q6P9F0 684 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 C4orf32Q8N8J7 132 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 GLT1D1Q96MS3 346 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 MTMR9Q96QG7 549 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 RIT2Q99578 217 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 AGO4Q9HCK5 861 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 STARD7Q9NQZ5 370 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 TBC1D22BQ9NU19 505 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 TCEAL9Q9UHQ7 104 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 RCOR1Q9UKL0 485 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 DOCK5Q9H7D0 1870 aa18.64■□□□□ 0.57
TSPAN4-208ENST00000409531 NFASCO94856 1347 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 ELP1O95163 1332 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 ZEB2O60315 1214 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 PPP6R2O75170 966 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 PTGS1P23219 599 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 NEDD9Q14511 834 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 SLC5A5Q92911 643 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 SDF4Q9BRK5 362 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 RAB34Q9BZG1 259 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 TMEM60Q9H2L4 133 aa18.63■□□□□ 0.57
TSPAN4-208ENST00000409531 GAS7O60861 476 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 ARIH2O95376 493 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 TXKP42681 527 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 RTP1P59025 263 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 LRCH2Q5VUJ6 765 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 DTHD1Q6ZMT9 781 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 LEO1Q8WVC0 666 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 HAS1Q92839 578 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 VTI1AQ96AJ9 217 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 TEKT3Q9BXF9 490 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 PCDHA12Q9UN75 941 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 ATP11BQ9Y2G3 1177 aa18.62■□□□□ 0.57
TSPAN4-208ENST00000409531 CABYRO75952 493 aa18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 CPT1AP50416 773 aa18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 KRI1Q8N9T8 703 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 OR6J1Q8NGC5 347 aa18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 COPS5Q92905 334 aa18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 TTC12Q9H892 705 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 DDX41Q9UJV9 622 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-208ENST00000409531 DNAH12Q6ZR08 3092 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 PSMD10O75832 226 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 KCNA2P16389 499 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 UBA1P22314 1058 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 MARCKSP29966 332 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 ME1P48163 572 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 FXR2P51116 673 aaKnown RBP eCLIP18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 LY6KQ17RY6 165 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 TRIM60Q495X7 471 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 CXCL17Q6UXB2 119 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 CHAMP1Q96JM3 812 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 PKD2L1Q9P0L9 805 aa18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 ZMYND8Q9ULU4 1186 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-208ENST00000409531 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 A6NJR5 290 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 GOLGA6L22H0YM25 854 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 ATP9AO75110 1047 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 GH1P01241 217 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 KRT76Q01546 638 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 TLE2Q04725 743 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 ITGB3BPQ13352 177 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 PDIA5Q14554 519 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 MLXIPQ9HAP2 919 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 JPH1Q9HDC5 661 aaPredicted RBP18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 STK24Q9Y6E0 443 aa18.59■□□□□ 0.57
TSPAN4-208ENST00000409531 WDR81Q562E7 1941 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 VWA3AA6NCI4 1184 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 DHX15O43143 795 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 KPNA6O60684 536 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 CUTAO60888 179 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 GGPS1O95749 300 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 SYN1P17600 705 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 LONP1P36776 959 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 TECP42680 631 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 CDK7P50613 346 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 SP2Q02086 613 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 PPP2R5CQ13362 524 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 CELF3Q5SZQ8 465 aaKnown RBP18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 ZNF746Q6NUN9 644 aaPredicted RBP18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 METTL7BQ6UX53 244 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 ANKRD33Q7Z3H0 272 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 AK8Q96MA6 479 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 TOX2Q96NM4 488 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 SLC9A2Q9UBY0 812 aa18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 FBXO2Q9UK22 296 aaPredicted RBP18.58■□□□□ 0.57
TSPAN4-208ENST00000409531 MYH9P35579 1960 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 A0A0U1RQG5 324 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 ARVCFO00192 962 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 SFNP31947 248 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 ARHGAP1Q07960 439 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 LAMC2Q13753 1193 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 CYFIP1Q7L576 1253 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 SMAP1Q8IYB5 467 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 IGSF22Q8N9C0 903 aa18.57■□□□□ 0.56
TSPAN4-208ENST00000409531 ZNF579Q8NAF0 562 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms