RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 STIM2Q9P246 746 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 GOLGA6L10A6NI86 522 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 EEF2P13639 858 aaKnown RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 CERKLQ49MI3 558 aaPredicted RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 MYCT1Q8N699 235 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 RPGRIP1Q96KN7 1286 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 CAPS2Q9BXY5 557 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 EBAG9O00559 213 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 TRIM37O94972 964 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 PPP1R2P41236 205 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 LRRC63Q05C16 580 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 CDC37Q16543 378 aaPredicted RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 SYCP3Q8IZU3 236 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 UBLCP1Q8WVY7 318 aaPredicted RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 ANO3Q9BYT9 981 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 CHORDC1Q9UHD1 332 aaPredicted RBP13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 HDAC9Q9UKV0 1011 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 SIK3Q9Y2K2 1263 aa13.92□□□□□ -0.18
PPP4R1-202ENST00000400555 PVALEFA0A1B0GWK0 134 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 TLDC2A0PJX2 215 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 GFPT2O94808 682 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 CEP85LQ5SZL2 805 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 WDR93Q6P2C0 686 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 CERS3Q8IU89 383 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 OR2W6PQ8NHA6 318 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 ZBTB5O15062 677 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 FAM153BP0C7A2 387 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 CASP5P51878 434 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 FAM153CQ494X1 144 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 IFT20Q8IY31 132 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 TSEN2Q8NCE0 465 aaKnown RBP13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 TBC1D22AQ8WUA7 517 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 TTYH3Q9C0H2 523 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 FAM153AQ9UHL3 310 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 OPA1O60313 960 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 LRRN2O75325 713 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 MED24O75448 989 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 FAM13AO94988 1023 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 GLI1P08151 1106 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 XRCC5P13010 732 aaKnown RBP13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 KCNMA1Q12791 1236 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 SRLQ86TD4 932 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 TEKT1Q969V4 418 aa13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 PPANQ9NQ55 473 aaKnown RBP13.91□□□□□ -0.18
PPP4R1-202ENST00000400555 ITGB4P16144 1822 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 ANO9A1A5B4 782 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 ZBTB39O15060 712 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 KCNA1Q09470 495 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 EXOC3L4Q17RC7 722 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 HAS1Q92839 578 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 MTMR9Q96QG7 549 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 TLR10Q9BXR5 811 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 DDX47Q9H0S4 455 aaKnown RBP13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 MYBP10242 640 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 ICA1Q05084 483 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 DAAM2Q86T65 1068 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 UBXN6Q9BZV1 441 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 LRRC4BQ9NT99 713 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 TMEM51Q9NW97 253 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 PPEF1O14829 653 aaPredicted RBP13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 COPB2P35606 906 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 CASP4P49662 377 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 NNTQ13423 1086 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 PEX26Q7Z412 305 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 ERMNQ8TAM6 284 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 RIC8AQ9NPQ8 531 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 CHD4Q14839 1912 aa13.9□□□□□ -0.18
PPP4R1-202ENST00000400555 SERPING1P05155 500 aa13.9□□□□□ -0.19
PPP4R1-202ENST00000400555 ANKS1AQ92625 1134 aa13.9□□□□□ -0.19
PPP4R1-202ENST00000400555 NT5C3AQ9H0P0 336 aa13.9□□□□□ -0.19
PPP4R1-202ENST00000400555 RIOX1Q9H6W3 641 aa13.9□□□□□ -0.19
PPP4R1-202ENST00000400555 TOM1O60784 492 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 GUCY1A3Q02108 690 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 CDC42EP5Q6NZY7 148 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 KIAA0754O94854 1291 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 ARHGAP4P98171 946 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 PTK2Q05397 1052 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 IFFO1Q0D2I5 559 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 ZC2HC1CQ53FD0 456 aaPredicted RBP13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 LRRC55Q6ZSA7 311 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 ATP6V0A2Q9Y487 856 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 CLRN2A0PK11 232 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 FECHP22830 423 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 ALKBH5Q6P6C2 394 aaKnown RBP13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 VPS36Q86VN1 386 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 CERS5Q8N5B7 392 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
PPP4R1-202ENST00000400555 NMT1P30419 496 aaKnown RBP13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TDRD3Q9H7E2 651 aaKnown RBP13.88□□□□□ -0.19
PPP4R1-202ENST00000400555 TCP10L2B9ZVM9 353 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms