RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 COL16A1Q07092 1604 aaPredicted RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 A6NNZ2 444 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 CYTH3O43739 400 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 ASNSP08243 561 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 KRT5P13647 590 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 STAT3P40763 770 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 CASP8Q14790 479 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 TUBB8Q3ZCM7 444 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 RNF187Q5TA31 235 aaPredicted RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 SEL1L2Q5TEA6 688 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 PIGOQ8TEQ8 1089 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 SCLT1Q96NL6 688 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 MTRF1LQ9UGC7 380 aaKnown RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 HERC5Q9UII4 1024 aaKnown RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 UTP11Q9Y3A2 253 aaKnown RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 SRGAP2O75044 1071 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 NDUFB10O96000 172 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 DESP17661 470 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 RXRBP28702 533 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 KCNH2Q12809 1159 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 SEPT7Q16181 437 aaKnown RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 E2F4Q16254 413 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 KNOP1Q1ED39 458 aaKnown RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 ARHGEF16Q5VV41 709 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 TTI2Q6NXR4 508 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 C15orf52Q6ZUT6 534 aaKnown RBP7.18□□□□□ -1.26
BDNF-203ENST00000395978 KCNG1Q9UIX4 513 aa7.18□□□□□ -1.26
BDNF-203ENST00000395978 MYO3BQ8WXR4 1341 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 SFI1A8K8P3 1242 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 KRIT1O00522 736 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 NEFHP12036 1026 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 BAG6P46379 1132 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 ZSCAN26Q16670 478 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 FAM102BQ5T8I3 360 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 DCAF15Q66K64 600 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 ALKBH5Q6P6C2 394 aaKnown RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 UBLCP1Q8WVY7 318 aaPredicted RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 PLEKHA4Q9H4M7 779 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 GCNT4Q9P109 453 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 TACC3Q9Y6A5 838 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 AFDNP55196 1824 aaKnown RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 RGPD5Q99666 1765 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 MARF1Q9Y4F3 1742 aaKnown RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 TLDC2A0PJX2 215 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 LRRC10BA6NIK2 292 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 ENTPD3O75355 529 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 FTCDO95954 541 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 LMNB1P20700 586 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 CTNNA2P26232 953 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 HOXA10P31260 410 aaPredicted RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 EVX2Q03828 476 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 STRN3Q13033 797 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 CALCOCO2Q13137 446 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 CLUL1Q15846 466 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 GRIK5Q16478 980 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 PTPROQ16827 1216 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 FAM43BQ6ZT52 329 aaPredicted RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 RNF10Q8N5U6 811 aaKnown RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 NKX2-3Q8TAU0 364 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 ERGIC2Q96RQ1 377 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 TRIM31Q9BZY9 425 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 HDAC6Q9UBN7 1215 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 TBX3O15119 743 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 SLC37A4O43826 429 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 NR3C1P04150 777 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 HDLBPQ00341 1268 aaKnown RBP7.17□□□□□ -1.26
BDNF-203ENST00000395978 GUCY2DQ02846 1103 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 C2orf54Q08AI8 447 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 NFIAQ12857 509 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 GRB10Q13322 594 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 PPP2R5EQ16537 467 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 TRIM65Q6PJ69 517 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 RUFY4Q6ZNE9 571 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 SPATA20Q8TB22 786 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 POLD4Q9HCU8 107 aa7.17□□□□□ -1.26
BDNF-203ENST00000395978 SLC26A4O43511 780 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 GUCY2FP51841 1108 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 ERVK-24P63145 666 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 MYL7Q01449 175 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 GNPTABQ3T906 1256 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 CCDC127Q96BQ5 260 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 TMEM206Q9H813 350 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 MLXIPQ9HAP2 919 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 AS3MTQ9HBK9 375 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 TYW1Q9NV66 732 aaKnown RBP7.16□□□□□ -1.26
BDNF-203ENST00000395978 INTS13Q9NVM9 706 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.16□□□□□ -1.26
BDNF-203ENST00000395978 GFPT2O94808 682 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 ATP1A1P05023 1023 aaKnown RBP7.16□□□□□ -1.26
BDNF-203ENST00000395978 EPHB4P54760 987 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 GFPT1Q06210 699 aaPredicted RBP7.16□□□□□ -1.26
BDNF-203ENST00000395978 PPP1R7Q15435 360 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 GRIPAP1Q4V328 841 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 PDXDC1Q6P996 788 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 PPM1KQ8N3J5 372 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 EXOC4Q96A65 974 aa7.16□□□□□ -1.26
BDNF-203ENST00000395978 FAM212AQ96EL1 285 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms