RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 CHTF18Q8WVB6 975 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 KCNN1Q92952 543 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 RIC8BQ9NVN3 520 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 H2AFY2Q9P0M6 372 aaPredicted RBP6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 ZKSCAN5Q9Y2L8 839 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 PCDHA5Q9Y5H7 936 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 ATP23Q9Y6H3 246 aa6.06□□□□□ -1.44
RNU6-560P-201ENST00000364007 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 BUB1BO60566 1050 aaPredicted RBP6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 CLASP2O75122 1294 aaKnown RBP6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 LRG1P02750 347 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 MESP2Q0VG99 397 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 ARHGAP44Q17R89 818 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 CR1LQ2VPA4 569 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 PAN2Q504Q3 1202 aaKnown RBP6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 FIGNQ5HY92 759 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 CREB3L3Q68CJ9 461 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 MIB1Q86YT6 1006 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 AFAP1L2Q8N4X5 818 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 DLG3Q92796 817 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 GPR101Q96P66 508 aaPredicted RBP6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 BOCQ9BWV1 1114 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 PCDH12Q9NPG4 1184 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 DTLQ9NZJ0 730 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 RBPJLQ9UBG7 517 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 WASF3Q9UPY6 502 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 NUB1Q9Y5A7 615 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 COL4A3BPQ9Y5P4 624 aa6.05□□□□□ -1.44
RNU6-560P-201ENST00000364007 ETV2O00321 342 aaPredicted RBP6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 GAS7O60861 476 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 EYA4O95677 639 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 C4BPAP04003 597 aaKnown RBP6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 NCAM1P13591 858 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 FAHP16930 419 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 SLC9A1P19634 815 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 ADCYAP1R1P41586 468 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 TMEM132BQ14DG7 1078 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 CD300LDQ6UXZ3 194 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 ETV3LQ6ZN32 361 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 LHFPL2Q6ZUX7 228 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 STK32CQ86UX6 486 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 IGDCC3Q8IVU1 814 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 SMC1BQ8NDV3 1235 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 OR2W6PQ8NHA6 318 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 MZB1Q8WU39 189 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 TOE1Q96GM8 510 aaKnown RBP6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 YIPF4Q9BSR8 244 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 PDGFDQ9GZP0 370 aaPredicted RBP6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 TMX1Q9H3N1 280 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 SPTLC3Q9NUV7 552 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 OXSMQ9NWU1 459 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 B3GALT1Q9Y5Z6 326 aa6.04□□□□□ -1.44
RNU6-560P-201ENST00000364007 NEMP1O14524 444 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 N4BP3O15049 544 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 FKBP9O95302 570 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 C8BP07358 591 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 BPIP17213 487 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 IL2P60568 153 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 DLG4P78352 724 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 CACNB2Q08289 660 aaPredicted RBP6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 SART3Q15020 963 aaKnown RBP6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 DHCR24Q15392 516 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 TEPPQ6URK8 271 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 SYDE1Q6ZW31 735 aaPredicted RBP6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 FKBP9P1Q75LS8 142 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 DDX42Q86XP3 938 aaKnown RBP eCLIP6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 TTLL11Q8NHH1 800 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 USP7Q93009 1102 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 DDX11Q96FC9 970 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 RNF114Q9Y508 228 aa6.03□□□□□ -1.44
RNU6-560P-201ENST00000364007 PRAMEF25A6NGN4 478 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 H7C1D1 291 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 SEMA7AO75326 666 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 IGFBP6P24592 240 aaPredicted RBP6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 THBS2P35442 1172 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 LIMS1P48059 325 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 KIF11P52732 1056 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 EVA1CP58658 441 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 TARBP2Q15633 366 aaKnown RBP6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 KIAA1958Q8N8K9 716 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 SMARCC2Q8TAQ2 1214 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 CPA5Q8WXQ8 436 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 ELF4Q99607 663 aaPredicted RBP6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 KCNH7Q9NS40 1196 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 ATP8A1Q9Y2Q0 1164 aa6.02□□□□□ -1.45
RNU6-560P-201ENST00000364007 RASSF10A6NK89 507 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 TGM5O43548 720 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 HIP1RO75146 1068 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 KRT1P04264 644 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 PFKLP17858 780 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 PTX3P26022 381 aaPredicted RBP6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 GJA4P35212 333 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 KPNA1P52294 538 aaPredicted RBP6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 NKX3-2P78367 333 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 FOXO4P98177 505 aa6.01□□□□□ -1.45
RNU6-560P-201ENST00000364007 ZNF648Q5T619 568 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms