RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 GRB14Q14449 540 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 DHX8Q14562 1220 aaKnown RBP17.46■□□□□ 0.39
CTSA-202ENST00000354880 ZNF792Q3KQV3 632 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 DPCR1Q3MIW9 517 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 L1TD1Q5T7N2 865 aaKnown RBP17.46■□□□□ 0.39
CTSA-202ENST00000354880 SEPT14Q6ZU15 432 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 KCTD17Q8N5Z5 321 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 FAM200AQ8TCP9 573 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 DYDC2Q96IM9 177 aa17.46■□□□□ 0.39
CTSA-202ENST00000354880 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 NFASCO94856 1347 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 ASB14A6NK59 587 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 E9PMD0 336 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 COBLO75128 1261 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 SLITRK3O94933 977 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 MUTP22033 750 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 ZNF165P49910 485 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 C11orf57Q6ZUT1 292 aaPredicted RBP17.45■□□□□ 0.38
CTSA-202ENST00000354880 NEK9Q8TD19 979 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 MORC4Q8TE76 937 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 C7orf25Q9BPX7 421 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 LRRC27Q9C0I9 530 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 DNM3Q9UQ16 869 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 SAMM50Q9Y512 469 aa17.45■□□□□ 0.38
CTSA-202ENST00000354880 SFNP31947 248 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 CRHR2Q13324 411 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 MORC3Q14149 939 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 CTTNQ14247 550 aaKnown RBP17.44■□□□□ 0.38
CTSA-202ENST00000354880 ZNF746Q6NUN9 644 aaPredicted RBP17.44■□□□□ 0.38
CTSA-202ENST00000354880 TPH2Q8IWU9 490 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 CAPNS2Q96L46 248 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 SENP7Q9BQF6 1050 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 NAT10Q9H0A0 1025 aaKnown RBP17.44■□□□□ 0.38
CTSA-202ENST00000354880 MCM3APO60318 1980 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 CA12O43570 354 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
CTSA-202ENST00000354880 P4HBP07237 508 aaKnown RBP17.44■□□□□ 0.38
CTSA-202ENST00000354880 PLA2G4BP0C869 781 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 BMP6P22004 513 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 JAK3P52333 1124 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 EEPD1Q7L9B9 569 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
CTSA-202ENST00000354880 JPH1Q9HDC5 661 aaPredicted RBP17.44■□□□□ 0.38
CTSA-202ENST00000354880 SLC15A5A6NIM6 579 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 WDR64B1ANS9 1081 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 CCNE2O96020 404 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 TGFB3P10600 412 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 PSMC6P62333 389 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
CTSA-202ENST00000354880 RDM1Q8NG50 284 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 LXNQ9BS40 222 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 CBX8Q9HC52 389 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 RMND1Q9NWS8 449 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 SLC9A2Q9UBY0 812 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 DIS3Q9Y2L1 958 aaKnown RBP17.43■□□□□ 0.38
CTSA-202ENST00000354880 DOCK5Q9H7D0 1870 aa17.43■□□□□ 0.38
CTSA-202ENST00000354880 MYMKA6NI61 221 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 AOC2O75106 756 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 SSBP05455 408 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTSA-202ENST00000354880 SP2Q02086 613 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 KCNV1Q6PIU1 500 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 ARMCX2Q7L311 632 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 SMAP1Q8IYB5 467 aaPredicted RBP17.42■□□□□ 0.38
CTSA-202ENST00000354880 BANK1Q8NDB2 785 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 KLRC4O43908 158 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 EYA4O95677 639 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 SLC12A3P55017 1021 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 ASIC1P78348 528 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 KCNB1Q14721 858 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 CNNM4Q6P4Q7 775 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 REM2Q8IYK8 340 aaPredicted RBP17.42■□□□□ 0.38
CTSA-202ENST00000354880 MLKLQ8NB16 471 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 GIMAP8Q8ND71 665 aaPredicted RBP17.42■□□□□ 0.38
CTSA-202ENST00000354880 DDX12PQ92771 950 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 NACC1Q96RE7 527 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 ZSWIM4Q9H7M6 989 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 PCDHA10Q9Y5I2 948 aa17.42■□□□□ 0.38
CTSA-202ENST00000354880 DOCK3Q8IZD9 2030 aa17.41■□□□□ 0.38
CTSA-202ENST00000354880 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSA-202ENST00000354880 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 NEDD9Q14511 834 aa17.41■□□□□ 0.38
CTSA-202ENST00000354880 CYFIP1Q7L576 1253 aa17.41■□□□□ 0.38
CTSA-202ENST00000354880 LUZP1Q86V48 1076 aa17.41■□□□□ 0.38
CTSA-202ENST00000354880 FBXO16Q8IX29 292 aaPredicted RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 SYT2Q8N9I0 419 aaPredicted RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 CCDC47Q96A33 483 aaKnown RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 BMP2KQ9NSY1 1161 aaPredicted RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
CTSA-202ENST00000354880 WRAP73Q9P2S5 460 aaPredicted RBP17.41■□□□□ 0.38
CTSA-202ENST00000354880 DACH1Q9UI36 760 aa17.41■□□□□ 0.38
CTSA-202ENST00000354880 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 KMT5BQ4FZB7 885 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 MORN1Q5T089 497 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 MAMDC4Q6UXC1 1216 aa17.4■□□□□ 0.38
CTSA-202ENST00000354880 DYMQ7RTS9 669 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms