RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SRCAPQ6ZRS2 3230 aa20.71■□□□□ 0.91
PSPC1-201ENST00000338910 MACROD2A1Z1Q3 448 aa20.7■□□□□ 0.91
PSPC1-201ENST00000338910 IPO7O95373 1038 aaKnown RBP20.7■□□□□ 0.91
PSPC1-201ENST00000338910 PMS1P54277 932 aaKnown RBP20.7■□□□□ 0.91
PSPC1-201ENST00000338910 ORC2Q13416 577 aaPredicted RBP20.7■□□□□ 0.91
PSPC1-201ENST00000338910 TTC19Q6DKK2 380 aaPredicted RBP20.7■□□□□ 0.91
PSPC1-201ENST00000338910 DCAF4Q8WV16 495 aa20.7■□□□□ 0.91
PSPC1-201ENST00000338910 GJA10Q969M2 543 aa20.7■□□□□ 0.91
PSPC1-201ENST00000338910 ARL8AQ96BM9 186 aa20.7■□□□□ 0.91
PSPC1-201ENST00000338910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.7■□□□□ 0.91
PSPC1-201ENST00000338910 PES1O00541 588 aaKnown RBP20.7■□□□□ 0.9
PSPC1-201ENST00000338910 FNTAP49354 379 aa20.7■□□□□ 0.9
PSPC1-201ENST00000338910 DNM2P50570 870 aa20.7■□□□□ 0.9
PSPC1-201ENST00000338910 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
PSPC1-201ENST00000338910 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
PSPC1-201ENST00000338910 ALS2CLQ60I27 953 aa20.7■□□□□ 0.9
PSPC1-201ENST00000338910 TSEN2Q8NCE0 465 aaKnown RBP20.7■□□□□ 0.9
PSPC1-201ENST00000338910 SECISBP2LQ93073 1101 aaKnown RBP20.7■□□□□ 0.9
PSPC1-201ENST00000338910 CALML4Q96GE6 196 aa20.7■□□□□ 0.9
PSPC1-201ENST00000338910 UIMC1Q96RL1 719 aa20.7■□□□□ 0.9
PSPC1-201ENST00000338910 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
PSPC1-201ENST00000338910 POTEMA6NI47 508 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 RASSF10A6NK89 507 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 MMP14P50281 582 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 EPHB4P54760 987 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 IKQ13123 557 aaPredicted RBP20.69■□□□□ 0.9
PSPC1-201ENST00000338910 EMBQ6PCB8 327 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 B4GALNT4Q76KP1 1039 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 AGBL3Q8NEM8 1001 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 SPATA4Q8NEY3 305 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 CUEDC2Q9H467 287 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 THAP9Q9H5L6 903 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 CXorf56Q9H5V9 222 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 MYL1P05976 194 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 VAV2P52735 878 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 KCNB1Q14721 858 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 SPDYE2Q495Y8 402 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 CDAN1Q8IWY9 1227 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 FAM151AQ8WW52 585 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 TRIM9Q9C026 710 aa20.69■□□□□ 0.9
PSPC1-201ENST00000338910 ZNHIT6Q9NWK9 470 aaKnown RBP20.69■□□□□ 0.9
PSPC1-201ENST00000338910 NDUFAB1O14561 156 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 NDUFB10O96000 172 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 CYP27A1Q02318 531 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 KIF5AQ12840 1032 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 TMEM266Q2M3C6 531 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 JDP2Q8WYK2 163 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 DDX25Q9UHL0 483 aaKnown RBP20.68■□□□□ 0.9
PSPC1-201ENST00000338910 CAPN7Q9Y6W3 813 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 CNTNAP1P78357 1384 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 RHOBTB3O94955 611 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 PRLRP16471 622 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 MAP2K2P36507 400 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 FXR2P51116 673 aaKnown RBP eCLIP20.68■□□□□ 0.9
PSPC1-201ENST00000338910 ZBED6P86452 979 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 PDCLQ13371 301 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 SPICE1Q8N0Z3 855 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 RETREG2Q8NC44 543 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 TRIM58Q8NG06 486 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 CAVIN3Q969G5 261 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 TSGA10Q9BZW7 698 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 TMEM39BQ9GZU3 492 aa20.68■□□□□ 0.9
PSPC1-201ENST00000338910 HERC5Q9UII4 1024 aaKnown RBP20.68■□□□□ 0.9
PSPC1-201ENST00000338910 COL2A1P02458 1487 aaPredicted RBP20.67■□□□□ 0.9
PSPC1-201ENST00000338910 B4DLN1 442 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 NFKBIEO00221 500 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 ZNF263O14978 683 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 FSBPO95073 299 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 TRIM21P19474 475 aaKnown RBP20.67■□□□□ 0.9
PSPC1-201ENST00000338910 ASIC1P78348 528 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 GRB10Q13322 594 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 PPP4R3AQ6IN85 833 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 GIMAP8Q8ND71 665 aaPredicted RBP20.67■□□□□ 0.9
PSPC1-201ENST00000338910 NUDT12Q9BQG2 462 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 NUP58Q9BVL2 599 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 A0A1W2PRG0 241 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 MARCH6O60337 910 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 CDK17Q00537 523 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 NBPF9Q3BBW0 867 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 CIAPIN1Q6FI81 312 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 SPATS2Q86XZ4 545 aaKnown RBP20.67■□□□□ 0.9
PSPC1-201ENST00000338910 MAGEF1Q9HAY2 307 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 BCS1LQ9Y276 419 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 CAPN6Q9Y6Q1 641 aa20.67■□□□□ 0.9
PSPC1-201ENST00000338910 MEFVO15553 781 aaPredicted RBP20.66■□□□□ 0.9
PSPC1-201ENST00000338910 ZEB2O60315 1214 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 TNFRSF8P28908 595 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 SLC7A5Q01650 507 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 PDE4DQ08499 809 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 USH1GQ495M9 461 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 CDK5RAP3Q96JB5 506 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 CABS1Q96KC9 395 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 EXOC1Q9NV70 894 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 STIM2Q9P246 746 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 SCAF8Q9UPN6 1271 aaKnown RBP20.66■□□□□ 0.9
PSPC1-201ENST00000338910 WNT10BO00744 389 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 HSF2BPO75031 334 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 HAUS3Q68CZ6 603 aa20.66■□□□□ 0.9
PSPC1-201ENST00000338910 SMCR8Q8TEV9 937 aaPredicted RBP20.66■□□□□ 0.9
PSPC1-201ENST00000338910 HAS1Q92839 578 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms