RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 CCDC122Q5T0U0 273 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 CCDC65Q8IXS2 484 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 MYOCDQ8IZQ8 938 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 PAGR1Q9BTK6 254 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 PANK4Q9NVE7 773 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 PCDHAC2Q9Y5I4 1007 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 ESYT3A0FGR9 886 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 TIMM44O43615 452 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 EVI5O60447 810 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 MFAP3LO75121 409 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 SUPT3HO75486 399 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 BBOX1O75936 387 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 FAM133BQ5BKY9 247 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 MFSD14BQ5SR56 506 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 CACNA2D3Q8IZS8 1091 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 SPICE1Q8N0Z3 855 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 PRCCQ92733 491 aaPredicted RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 SEC16BQ96JE7 1060 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 NOP53Q9NZM5 478 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 SAP30BPQ9UHR5 308 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 hCG_2014768A0A024R1R8 64 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 MACROD2A1Z1Q3 448 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 TARSL2A2RTX5 802 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 PHF20L1A8MW92 1017 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 PRC1O43663 620 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 CXCR5P32302 372 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 XRCC4Q13426 336 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 ADAM9Q13443 819 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 DRP2Q13474 957 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 KCTD19Q17RG1 926 aaPredicted RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 NCCRP1Q6ZVX7 275 aaPredicted RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 DHX32Q7L7V1 743 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 SAMD3Q8N6K7 520 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 CCDC63Q8NA47 563 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 RMDN2Q96LZ7 410 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 SRPK1Q96SB4 655 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 NDNQ99608 321 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 CHP1Q99653 195 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
SF3B2-201ENST00000322535 EHD2Q9NZN4 543 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 ATXN10Q9UBB4 475 aa11.26□□□□□ -0.61
SF3B2-201ENST00000322535 LRRD1A4D1F6 860 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 LDHAP00338 332 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 LDHBP07195 334 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 NPR1P16066 1061 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 ANTXR2P58335 489 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 ZNF804AQ7Z570 1209 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 OPTNQ96CV9 577 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 L3MBTL3Q96JM7 780 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 TUBE1Q9UJT0 475 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 TNS1Q9HBL0 1735 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 A6NNZ2 444 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 USP17L12C9JPN9 530 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 USP17L21D6R901 530 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 CEP104O60308 925 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 FAM200BP0CF97 657 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 IDEP14735 1019 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 CMA1P23946 247 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 STAT6P42226 847 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 DNA2P51530 1060 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 CKAP4Q07065 602 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 NR1I3Q14994 352 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 RNF220Q5VTB9 566 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 ANO1Q5XXA6 986 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 KDM7AQ6ZMT4 941 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 ZBTB8BQ8NAP8 495 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 SYT15Q9BQS2 421 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 TRPV5Q9NQA5 729 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 GGT7Q9UJ14 662 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 STK38LQ9Y2H1 464 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 ATP6V0A2Q9Y487 856 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 IRS2Q9Y4H2 1338 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 CACNA1SQ13698 1873 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 GMNCA6NCL1 334 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 ZNF233A6NK53 670 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 RGL2O15211 777 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 AOC3Q16853 763 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
SF3B2-201ENST00000322535 NAA15Q9BXJ9 866 aaKnown RBP11.25□□□□□ -0.61
SF3B2-201ENST00000322535 RETREG1Q9H6L5 497 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms