RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 WRNIP1Q96S55 665 aa20.25■□□□□ 0.83
SHISA3-201ENST00000319234 PICK1Q9NRD5 415 aa20.25■□□□□ 0.83
SHISA3-201ENST00000319234 PPP1R9AQ9ULJ8 1098 aa20.25■□□□□ 0.83
SHISA3-201ENST00000319234 FLOT1O75955 427 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 SEC31AO94979 1220 aaKnown RBP20.24■□□□□ 0.83
SHISA3-201ENST00000319234 SSBP05455 408 aaKnown RBP eCLIP20.24■□□□□ 0.83
SHISA3-201ENST00000319234 BACE1P56817 501 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 PRAMEF18Q5VWM3 479 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 MCF2L2Q86YR7 1114 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 GUF1Q8N442 669 aaKnown RBP20.24■□□□□ 0.83
SHISA3-201ENST00000319234 CSGALNACT2Q8N6G5 542 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 MSANTD4Q8NCY6 345 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 CLEC4DQ8WXI8 215 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 GGA3Q9NZ52 723 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 PNMA2Q9UL42 364 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 CAPN11Q9UMQ6 739 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 LUC7L2Q9Y383 392 aaKnown RBP20.24■□□□□ 0.83
SHISA3-201ENST00000319234 RABGAP1Q9Y3P9 1069 aa20.24■□□□□ 0.83
SHISA3-201ENST00000319234 A0A0U1RQJ8 604 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 RNF225M0QZC1 329 aaPredicted RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 TUBBP07437 444 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 SPATA31C1P0DKV0 1188 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 PTPRAP18433 802 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 EPS15P42566 896 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 HIRAP54198 1017 aaPredicted RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 GHRHRQ02643 423 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 TSR1Q2NL82 804 aaKnown RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 CEP55Q53EZ4 464 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 TAF3Q5VWG9 929 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 CENPPQ6IPU0 288 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 ZNF662Q6ZS27 426 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 FAM114A1Q8IWE2 563 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 RETREG2Q8NC44 543 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 ZNF280CQ8ND82 737 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 ATRIPQ8WXE1 791 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 SLC5A5Q92911 643 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 ZKSCAN4Q969J2 545 aaPredicted RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 POLR3CQ9BUI4 534 aaPredicted RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 NUP58Q9BVL2 599 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 RPAP3Q9H6T3 665 aaPredicted RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 EPN1Q9Y6I3 576 aaPredicted RBP20.23■□□□□ 0.83
SHISA3-201ENST00000319234 DOCK1Q14185 1865 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 NDUFA10O95299 355 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 FDX1P10109 184 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 GPBP1Q86WP2 473 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 EPC1Q9H2F5 836 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 SEMA6BQ9H3T3 888 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 ST7Q9NRC1 585 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 RAB21Q9UL25 225 aa20.23■□□□□ 0.83
SHISA3-201ENST00000319234 TTC26A0AVF1 554 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 POTEFA5A3E0 1075 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 ZBED4O75132 1171 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 POTEIP0CG38 1075 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 UBXN2AP68543 259 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 COASYQ13057 564 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 POTEGQ6S5H5 508 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 POTEEQ6S8J3 1075 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 CCDC65Q8IXS2 484 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 CPXCR1Q8N123 301 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 KCTD17Q8N5Z5 321 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 SAMD3Q8N6K7 520 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 HAUS4Q9H6D7 363 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
SHISA3-201ENST00000319234 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
SHISA3-201ENST00000319234 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
SHISA3-201ENST00000319234 MEIS1O00470 390 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 PSMD10O75832 226 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 CYP11B2P19099 503 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 MSL3Q8N5Y2 521 aaKnown RBP20.21■□□□□ 0.83
SHISA3-201ENST00000319234 IQCDQ96DY2 449 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 MAP3K20Q9NYL2 800 aaKnown RBP20.21■□□□□ 0.83
SHISA3-201ENST00000319234 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
SHISA3-201ENST00000319234 RPTORQ8N122 1335 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 NFIBO00712 420 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 SASH3O75995 380 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 ALAS1P13196 640 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 SETQ01105 290 aaPredicted RBP20.21■□□□□ 0.83
SHISA3-201ENST00000319234 PPP2R5CQ13362 524 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 MEA1Q16626 185 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 LRCH2Q5VUJ6 765 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 EIF2AK1Q9BQI3 630 aaKnown RBP20.21■□□□□ 0.83
SHISA3-201ENST00000319234 FUT8Q9BYC5 575 aa20.21■□□□□ 0.83
SHISA3-201ENST00000319234 PITPNM2Q9BZ72 1349 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 EML1O00423 815 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 ERLIN1O75477 346 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 SUPT20HL1Q3ZLR7 823 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 FOXR2Q6PJQ5 311 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 SYT2Q8N9I0 419 aaPredicted RBP20.2■□□□□ 0.82
SHISA3-201ENST00000319234 C12orf42Q96LP6 360 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 MXRA8Q9BRK3 442 aa20.2■□□□□ 0.82
SHISA3-201ENST00000319234 FHDC1Q9C0D6 1143 aaPredicted RBP20.2■□□□□ 0.82
SHISA3-201ENST00000319234 CCDC66A2RUB6 948 aa20.19■□□□□ 0.82
SHISA3-201ENST00000319234 CTAGE15A4D2H0 777 aa20.19■□□□□ 0.82
SHISA3-201ENST00000319234 C19orf81C9J6K1 198 aa20.19■□□□□ 0.82
SHISA3-201ENST00000319234 CTAGE8P0CG41 777 aa20.19■□□□□ 0.82
SHISA3-201ENST00000319234 PSMC6P62333 389 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms