RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 DPEP1P16444 411 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 KCNA3P22001 575 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 SATB1Q01826 763 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 KLRC3Q07444 240 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 SPA17Q15506 151 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 KCTD19Q17RG1 926 aaPredicted RBP17.8■□□□□ 0.44
LONRF3-201ENST00000304778 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 BCAS4Q8TDM0 211 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 SLC39A2Q9NP94 309 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 STK17AQ9UEE5 414 aa17.8■□□□□ 0.44
LONRF3-201ENST00000304778 CLRN2A0PK11 232 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 PDE2AO00408 941 aaPredicted RBP17.79■□□□□ 0.44
LONRF3-201ENST00000304778 GH2P01242 217 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SV2BQ7L1I2 683 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 LARGE2Q8N3Y3 721 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 FAM76AQ8TAV0 307 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 ZC3H4Q9UPT8 1303 aaKnown RBP17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SETQ01105 290 aaPredicted RBP17.79■□□□□ 0.44
LONRF3-201ENST00000304778 GRB10Q13322 594 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 CDC37Q16543 378 aaPredicted RBP17.79■□□□□ 0.44
LONRF3-201ENST00000304778 VWA3BQ502W6 1294 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 RBM26Q5T8P6 1007 aaKnown RBP17.79■□□□□ 0.44
LONRF3-201ENST00000304778 IQCEQ6IPM2 695 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 CNPY4Q8N129 248 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 TRIM58Q8NG06 486 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 JADE2Q9NQC1 790 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 BLOC1S4Q9NUP1 217 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SMARCAL1Q9NZC9 954 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 LRWD1Q9UFC0 647 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SIK3Q9Y2K2 1263 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 CAPN7Q9Y6W3 813 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 ABCB11O95342 1321 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 CCDC189A1A4V9 331 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SPDYE2BA6NHP3 402 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SPDYE6P0CI01 402 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SCP2P22307 547 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 SNAP25P60880 206 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 UNC13DQ70J99 1090 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 HDAC7Q8WUI4 952 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 PSMB7Q99436 277 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 PSMD1Q99460 953 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
LONRF3-201ENST00000304778 PCDHA1Q9Y5I3 950 aa17.79■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L13C9JLJ4 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L11C9JVI0 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L18D6R9N7 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L22D6RA61 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L17D6RBQ6 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L19D6RCP7 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L20D6RJB6 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 AGPSO00116 658 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 PLEKP08567 350 aaPredicted RBP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 FXR2P51116 673 aaKnown RBP eCLIP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 C2orf54Q08AI8 447 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L24Q0WX57 530 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USP17L6PQ6QN14 398 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 SMCR8Q8TEV9 937 aaPredicted RBP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 COG1Q8WTW3 980 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 NDST4Q9H3R1 872 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 ARHGAP20Q9P2F6 1191 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 PVALEFA0A1B0GWK0 134 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 MYMKA6NI61 221 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 USO1O60763 962 aaKnown RBP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 NDUFB10O96000 172 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 KRT26Q7Z3Y9 468 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 GIMAP7Q8NHV1 300 aa17.78■□□□□ 0.44
LONRF3-201ENST00000304778 LARP4BQ92615 738 aaKnown RBP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
LONRF3-201ENST00000304778 MYO1FO00160 1098 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.44
LONRF3-201ENST00000304778 MAN2A1Q16706 1144 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 TMEM266Q2M3C6 531 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 PPP4R3AQ6IN85 833 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 GMCL1P1Q8NEA9 526 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 SH2D4AQ9H788 454 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 TMOD2Q9NZR1 351 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 SNX12Q9UMY4 172 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 COL4A5P29400 1685 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 POTEMA6NI47 508 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 MATR3P43243 847 aaKnown RBP eCLIP17.77■□□□□ 0.44
LONRF3-201ENST00000304778 RPAINQ86UA6 219 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 GUF1Q8N442 669 aaKnown RBP17.77■□□□□ 0.44
LONRF3-201ENST00000304778 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
LONRF3-201ENST00000304778 CABS1Q96KC9 395 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 PNMA5Q96PV4 448 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 GMLQ99445 158 aa17.77■□□□□ 0.44
LONRF3-201ENST00000304778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.77■□□□□ 0.44
LONRF3-201ENST00000304778 DDX25Q9UHL0 483 aaKnown RBP17.77■□□□□ 0.44
LONRF3-201ENST00000304778 SHTN1A0MZ66 631 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 GOLGA6CA6NDK9 693 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 H0YHG0 523 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 EPHB6O15197 1021 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 TACC1O75410 805 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 GOLGA6DP0CG33 693 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 KIF11P52732 1056 aa17.76■□□□□ 0.43
LONRF3-201ENST00000304778 DLGAP5Q15398 846 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms