RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 MKRN1Q9UHC7 482 aaKnown RBP18.72■□□□□ 0.59
CDCP1-201ENST00000296129 ZMYND10O75800 440 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 ALX1Q15699 326 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 RUNDC3BQ96NL0 473 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 UBN2Q6ZU65 1347 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 PTPRMP28827 1452 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 EXOC8Q8IYI6 725 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 HOMER3Q9NSC5 361 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 BUB1BO60566 1050 aaPredicted RBP18.71■□□□□ 0.59
CDCP1-201ENST00000296129 ASNSP08243 561 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 PDXDC2PQ6P474 469 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 PNMA8AQ86V59 439 aaPredicted RBP18.71■□□□□ 0.59
CDCP1-201ENST00000296129 CCDC170Q8IYT3 715 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 PIM2Q9P1W9 311 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 SGK1O00141 431 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 NDUFA10O95299 355 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 MXI1P50539 228 aa18.71■□□□□ 0.59
CDCP1-201ENST00000296129 XPOTO43592 962 aaKnown RBP18.7■□□□□ 0.58
CDCP1-201ENST00000296129 PHLDB2Q86SQ0 1253 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 ZNF579Q8NAF0 562 aaKnown RBP18.7■□□□□ 0.58
CDCP1-201ENST00000296129 CAPS2Q9BXY5 557 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 SNX1Q13596 522 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 ANKRD20A3Q5VUR7 823 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 C1orf167Q5SNV9 1468 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L15C9J2P7 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L13C9JLJ4 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L11C9JVI0 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L18D6R9N7 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L22D6RA61 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L17D6RBQ6 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L19D6RCP7 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L20D6RJB6 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 GOLGA8SH3BPF8 625 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 TROVE2P10155 538 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDCP1-201ENST00000296129 MARK3P27448 753 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 ABCD1P33897 745 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L24Q0WX57 530 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 USP17L6PQ6QN14 398 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 FAM84BQ96KN1 310 aaPredicted RBP18.7■□□□□ 0.58
CDCP1-201ENST00000296129 NEXMIFQ5QGS0 1516 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 KIF11P52732 1056 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 NUB1Q9Y5A7 615 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 HOXA7P31268 230 aaPredicted RBP18.7■□□□□ 0.58
CDCP1-201ENST00000296129 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 UNC13DQ70J99 1090 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 FAM71BQ8TC56 605 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 UBE2Q2Q8WVN8 375 aa18.7■□□□□ 0.58
CDCP1-201ENST00000296129 NXF1Q9UBU9 619 aaKnown RBP18.7■□□□□ 0.58
CDCP1-201ENST00000296129 MAP7D3Q8IWC1 876 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 TRIM49BA6NDI0 452 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 RCAN1P53805 252 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 FAM81BQ96LP2 452 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 EPB41L5Q9HCM4 733 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 HEXIM1O94992 359 aaKnown RBP18.69■□□□□ 0.58
CDCP1-201ENST00000296129 OATP04181 439 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 PRR29P0C7W0 189 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 PODNQ7Z5L7 613 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 BANK1Q8NDB2 785 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 MYO3BQ8WXR4 1341 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 RABL6Q3YEC7 729 aaPredicted RBP18.69■□□□□ 0.58
CDCP1-201ENST00000296129 SNX25Q9H3E2 840 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 ZNF277Q9NRM2 450 aaPredicted RBP18.69■□□□□ 0.58
CDCP1-201ENST00000296129 PGRMC1O00264 195 aaKnown RBP18.69■□□□□ 0.58
CDCP1-201ENST00000296129 MFAP3LO75121 409 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 CYP27A1Q02318 531 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 RSPH3Q86UC2 560 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 CACNA2D3Q8IZS8 1091 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 RAVER2Q9HCJ3 691 aaKnown RBP18.69■□□□□ 0.58
CDCP1-201ENST00000296129 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 MAD1L1Q9Y6D9 718 aa18.69■□□□□ 0.58
CDCP1-201ENST00000296129 PEX3P56589 373 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 KSR1Q8IVT5 923 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 RAD54LQ92698 747 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 FAM114A2Q9NRY5 505 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 CD58P19256 250 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 ALCAMQ13740 583 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 ARHGAP24Q8N264 748 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 AFG3L2Q9Y4W6 797 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 ABCB11O95342 1321 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 KRT1P04264 644 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 SRGAP2CP0DJJ0 459 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 TTC19Q6DKK2 380 aaPredicted RBP18.68■□□□□ 0.58
CDCP1-201ENST00000296129 SMIM5Q71RC9 77 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 FEM1BQ9UK73 627 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 DIP2CQ9Y2E4 1556 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 KCTD16Q68DU8 428 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 GSDMBQ8TAX9 411 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 POLR1AO95602 1720 aaPredicted RBP18.68■□□□□ 0.58
CDCP1-201ENST00000296129 MTMR1Q13613 665 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 SGO2Q562F6 1265 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 SLC27A3Q5K4L6 730 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 RCSD1Q6JBY9 416 aa18.68■□□□□ 0.58
CDCP1-201ENST00000296129 FMR1NBQ8N0W7 255 aaPredicted RBP18.68■□□□□ 0.58
CDCP1-201ENST00000296129 PRELPP51888 382 aa18.67■□□□□ 0.58
CDCP1-201ENST00000296129 ZSCAN26Q16670 478 aa18.67■□□□□ 0.58
CDCP1-201ENST00000296129 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
CDCP1-201ENST00000296129 ALDH8A1Q9H2A2 487 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms